RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 KCNIP3Q9Y2W7 256 aa13.94□□□□□ -0.18
COL1A1-207ENST00000486572 S4R3C0 116 aa13.94□□□□□ -0.18
COL1A1-207ENST00000486572 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 A0A0B4J293 547 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 WI2-2373I1.2A0A1W2PRP0 233 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 MFSD2BA6NFX1 497 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 PPP5D1E7EU14 171 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 K7EIL1 84 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 IGHV3-23P01764 117 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 AKR1C4P17516 323 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 BAK1Q16611 211 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 TATDN3Q17R31 274 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 TMEM268Q5VZI3 342 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 OR9G4Q8NGQ1 327 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 OR1L6Q8NGR2 347 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 PLEKHA3Q9HB20 300 aa13.93□□□□□ -0.18
COL1A1-207ENST00000486572 A0A0G2JRQ6 117 aa13.92□□□□□ -0.18
COL1A1-207ENST00000486572 ARL3P36405 182 aa13.92□□□□□ -0.18
COL1A1-207ENST00000486572 SLC25A24Q6NUK1 477 aa13.92□□□□□ -0.18
COL1A1-207ENST00000486572 CLEC19AQ6UXS0 136 aa13.92□□□□□ -0.18
COL1A1-207ENST00000486572 SELENOHQ8IZQ5 122 aaKnown RBP13.92□□□□□ -0.18
COL1A1-207ENST00000486572 SDHCQ99643 169 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-207ENST00000486572 SLC25A21Q9BQT8 299 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-207ENST00000486572 PDCD10Q9BUL8 212 aa13.92□□□□□ -0.18
COL1A1-207ENST00000486572 TMEM56-RWDD3S4R434 201 aa13.92□□□□□ -0.18
COL1A1-207ENST00000486572 ST8SIA3O43173 380 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 GGCTO75223 188 aaKnown RBP13.91□□□□□ -0.18
COL1A1-207ENST00000486572 IFNA17P01571 189 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 MFAP2P55001 183 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 SUPT4H1P63272 117 aaKnown RBP13.91□□□□□ -0.18
COL1A1-207ENST00000486572 TMEM187Q14656 261 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 TMED4Q7Z7H5 227 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 OR2C3Q8N628 320 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 SLC35G3Q8N808 338 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 ZNF114Q8NC26 417 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 OR1P1Q8NH06 330 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 ZNF502Q8TBZ5 544 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 VN1R17PQ8TDU5 208 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 IL22RA2Q969J5 263 aa13.91□□□□□ -0.18
COL1A1-207ENST00000486572 ZNF256Q9Y2P7 627 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-207ENST00000486572 NAP1L6A6NFF2 107 aa13.9□□□□□ -0.18
COL1A1-207ENST00000486572 ANXA3P12429 323 aa13.9□□□□□ -0.18
COL1A1-207ENST00000486572 SPINK9Q5DT21 86 aa13.9□□□□□ -0.18
COL1A1-207ENST00000486572 PRR13Q9NZ81 148 aa13.9□□□□□ -0.18
COL1A1-207ENST00000486572 PEMTQ9UBM1 199 aa13.9□□□□□ -0.18
COL1A1-207ENST00000486572 DNAH3Q8TD57 4116 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 A6NHS1 94 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 HLA-AP01891 365 aaKnown RBP13.89□□□□□ -0.19
COL1A1-207ENST00000486572 IL7P13232 177 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 GPR183P32249 361 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 SRPXP78539 464 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 ERHP84090 104 aaKnown RBP13.89□□□□□ -0.19
COL1A1-207ENST00000486572 RBMS2Q15434 407 aaKnown RBP13.89□□□□□ -0.19
COL1A1-207ENST00000486572 AARDQ4LEZ3 155 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 TMEM128Q5BJH2 165 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 IL34Q6ZMJ4 242 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 Q6ZRM9 215 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 PRR25Q96S07 402 aa13.89□□□□□ -0.19
COL1A1-207ENST00000486572 PRKDCP78527 4128 aaKnown RBP13.88□□□□□ -0.19
COL1A1-207ENST00000486572 INS-IGF2F8WCM5 200 aa13.88□□□□□ -0.19
COL1A1-207ENST00000486572 OR2C1O95371 312 aa13.88□□□□□ -0.19
COL1A1-207ENST00000486572 IGLV1-51P01701 117 aa13.88□□□□□ -0.19
COL1A1-207ENST00000486572 CLEC3BP05452 202 aa13.88□□□□□ -0.19
COL1A1-207ENST00000486572 HOXA1P49639 335 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-207ENST00000486572 GPR146Q96CH1 333 aa13.88□□□□□ -0.19
COL1A1-207ENST00000486572 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-207ENST00000486572 CACNG5Q9UF02 275 aa13.88□□□□□ -0.19
COL1A1-207ENST00000486572 A0A0B4J2A0 478 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 PIGBOS1A0A0B4J2F0 54 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 LINC00854A0A1B0GVQ3 168 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 CENPXA8MT69 81 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 K7EIM0 57 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 LY86O95711 162 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 CSN3P07498 182 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 SNCAP37840 140 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 CCR6P51684 374 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 DCTN2Q13561 401 aaKnown RBP13.87□□□□□ -0.19
COL1A1-207ENST00000486572 CNPY1Q3B7I2 92 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 DEFB121Q5J5C9 76 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 LINC00299Q6ZSB3 139 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 HAPLN4Q86UW8 402 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 GPHB5Q86YW7 130 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 LGI3Q8N145 548 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 CENPSQ8N2Z9 138 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 SCARB1Q8WTV0 552 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 MISP3Q96FF7 219 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 ATP6V0BQ99437 205 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 C7orf50Q9BRJ6 194 aaKnown RBP13.87□□□□□ -0.19
COL1A1-207ENST00000486572 ENY2Q9NPA8 101 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 C21orf62Q9NYP8 219 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 SIGLEC8Q9NYZ4 499 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 SHPKQ9UHJ6 478 aa13.87□□□□□ -0.19
COL1A1-207ENST00000486572 TGP01266 2768 aa13.86□□□□□ -0.19
COL1A1-207ENST00000486572 IGHV3-21A0A0B4J1V1 117 aa13.86□□□□□ -0.19
COL1A1-207ENST00000486572 LGALS9O00182 355 aa13.86□□□□□ -0.19
COL1A1-207ENST00000486572 SPNP16150 400 aa13.86□□□□□ -0.19
COL1A1-207ENST00000486572 VAMP1P23763 118 aa13.86□□□□□ -0.19
COL1A1-207ENST00000486572 SPCS3P61009 180 aa13.86□□□□□ -0.19
COL1A1-207ENST00000486572 PLET1Q6UQ28 207 aa13.86□□□□□ -0.19
COL1A1-207ENST00000486572 OR52E5Q8NH55 327 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms