RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 IZUMO1RA6ND01 250 aa13.87□□□□□ -0.19
CLDN11-206ENST00000486429 AKAIN1P0CW23 69 aa13.87□□□□□ -0.19
CLDN11-206ENST00000486429 EDN2P20800 178 aa13.87□□□□□ -0.19
CLDN11-206ENST00000486429 MFAP2P55001 183 aa13.87□□□□□ -0.19
CLDN11-206ENST00000486429 PRCDQ00LT1 54 aa13.87□□□□□ -0.19
CLDN11-206ENST00000486429 TRIM16LQ309B1 348 aa13.87□□□□□ -0.19
CLDN11-206ENST00000486429 CD300EQ496F6 205 aaPredicted RBP13.87□□□□□ -0.19
CLDN11-206ENST00000486429 PLET1Q6UQ28 207 aa13.87□□□□□ -0.19
CLDN11-206ENST00000486429 OR4C16Q8NGL9 310 aa13.87□□□□□ -0.19
CLDN11-206ENST00000486429 THAP7Q9BT49 309 aaPredicted RBP13.87□□□□□ -0.19
CLDN11-206ENST00000486429 C14orf166Q9Y224 244 aaKnown RBP13.87□□□□□ -0.19
CLDN11-206ENST00000486429 TENM3Q9P273 2699 aa13.87□□□□□ -0.19
CLDN11-206ENST00000486429 TMEM213A2RRL7 107 aa13.86□□□□□ -0.19
CLDN11-206ENST00000486429 CCDC160A6NGH7 325 aa13.86□□□□□ -0.19
CLDN11-206ENST00000486429 TGOLN2O43493 480 aa13.86□□□□□ -0.19
CLDN11-206ENST00000486429 GSTZ1O43708 216 aaPredicted RBP13.86□□□□□ -0.19
CLDN11-206ENST00000486429 IGKV1-5P01602 117 aa13.86□□□□□ -0.19
CLDN11-206ENST00000486429 SURF2Q15527 256 aaPredicted RBP13.86□□□□□ -0.19
CLDN11-206ENST00000486429 OR1P1Q8NH06 330 aa13.86□□□□□ -0.19
CLDN11-206ENST00000486429 CACNG8Q8WXS5 425 aa13.86□□□□□ -0.19
CLDN11-206ENST00000486429 PLEKHA3Q9HB20 300 aa13.86□□□□□ -0.19
CLDN11-206ENST00000486429 C21orf62Q9NYP8 219 aa13.86□□□□□ -0.19
CLDN11-206ENST00000486429 TECRQ9NZ01 308 aaKnown RBP13.86□□□□□ -0.19
CLDN11-206ENST00000486429 CEPT1Q9Y6K0 416 aa13.86□□□□□ -0.19
CLDN11-206ENST00000486429 IGHV3-21A0A0B4J1V1 117 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 A8MZ25 164 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 B3GALNT1O75752 331 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 CBLN1P23435 193 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 UCP1P25874 307 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 HSPE1P61604 102 aaKnown RBP13.85□□□□□ -0.19
CLDN11-206ENST00000486429 IZUMO4Q1ZYL8 232 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 DEFB114Q30KQ6 69 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 OR2C3Q8N628 320 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 RNASE11Q8TAA1 199 aaKnown RBP13.85□□□□□ -0.19
CLDN11-206ENST00000486429 BSCL2Q96G97 398 aaPredicted RBP13.85□□□□□ -0.19
CLDN11-206ENST00000486429 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 PRRT1Q99946 306 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 PALMDQ9NP74 551 aa13.85□□□□□ -0.19
CLDN11-206ENST00000486429 IGHV3-35A0A0C4DH35 117 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 OR2T8A6NH00 312 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 K7EIM0 57 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 TNFSF8P32971 234 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 SP6Q3SY56 376 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 UNQ9165/PRO28630Q6UXU0 137 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 ZNF114Q8NC26 417 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 SCARB1Q8WTV0 552 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 NXF2Q9GZY0 626 aaKnown RBP13.84□□□□□ -0.19
CLDN11-206ENST00000486429 C19orf73Q9NVV2 129 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 SLC2A8Q9NY64 477 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 UFC1Q9Y3C8 167 aa13.84□□□□□ -0.19
CLDN11-206ENST00000486429 ANKRD20A5PA0PJZ0 165 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 FABP12A6NFH5 140 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 P0C879 139 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 CD81P60033 236 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 GUCA2BQ16661 112 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 Q56UQ5 140 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 SPSB3Q6PJ21 355 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 SLC35G3Q8N808 338 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 UBAC2Q8NBM4 344 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 OR51S1Q8NGJ8 323 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 TMEM190Q8WZ59 177 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 MARC2Q969Z3 335 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 RRNAD1Q96FB5 475 aaKnown RBP13.83□□□□□ -0.2
CLDN11-206ENST00000486429 MISP3Q96FF7 219 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 RCHY1Q96PM5 261 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 PDCD10Q9BUL8 212 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 ZNF436Q9C0F3 470 aaPredicted RBP13.83□□□□□ -0.2
CLDN11-206ENST00000486429 NAA60Q9H7X0 242 aa13.83□□□□□ -0.2
CLDN11-206ENST00000486429 TEX13DA0A0J9YY54 714 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-206ENST00000486429 OR5AC1P0C628 307 aa13.82□□□□□ -0.2
CLDN11-206ENST00000486429 ELLP55199 621 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-206ENST00000486429 ERHP84090 104 aaKnown RBP13.82□□□□□ -0.2
CLDN11-206ENST00000486429 SPINK9Q5DT21 86 aa13.82□□□□□ -0.2
CLDN11-206ENST00000486429 ZNF57Q68EA5 555 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-206ENST00000486429 BTNL8Q6UX41 500 aa13.82□□□□□ -0.2
CLDN11-206ENST00000486429 UXS1Q8NBZ7 420 aa13.82□□□□□ -0.2
CLDN11-206ENST00000486429 WDR89Q96FK6 387 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-206ENST00000486429 RTBDNQ9BSG5 229 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-206ENST00000486429 TMEM222Q9H0R3 208 aa13.82□□□□□ -0.2
CLDN11-206ENST00000486429 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
CLDN11-206ENST00000486429 TUBA4BQ9H853 241 aa13.82□□□□□ -0.2
CLDN11-206ENST00000486429 ZMAT4Q9H898 229 aa13.82□□□□□ -0.2
CLDN11-206ENST00000486429 GAR1Q9NY12 217 aaKnown RBP13.82□□□□□ -0.2
CLDN11-206ENST00000486429 MLXQ9UH92 298 aa13.82□□□□□ -0.2
CLDN11-206ENST00000486429 ST8SIA3O43173 380 aa13.81□□□□□ -0.2
CLDN11-206ENST00000486429 IFNA17P01571 189 aa13.81□□□□□ -0.2
CLDN11-206ENST00000486429 TM4SF20Q53R12 229 aa13.81□□□□□ -0.2
CLDN11-206ENST00000486429 TMEM61Q8N0U2 210 aa13.81□□□□□ -0.2
CLDN11-206ENST00000486429 SOSTQ9BQB4 213 aa13.81□□□□□ -0.2
CLDN11-206ENST00000486429 NEURL2Q9BR09 285 aa13.81□□□□□ -0.2
CLDN11-206ENST00000486429 MCUBQ9NWR8 336 aa13.81□□□□□ -0.2
CLDN11-206ENST00000486429 SCP2D1Q9UJQ7 156 aa13.81□□□□□ -0.2
CLDN11-206ENST00000486429 SELENOKQ9Y6D0 94 aa13.81□□□□□ -0.2
CLDN11-206ENST00000486429 A0A0B4J293 547 aa13.8□□□□□ -0.2
CLDN11-206ENST00000486429 ZNF785A8K8V0 405 aa13.8□□□□□ -0.2
CLDN11-206ENST00000486429 F8W735 103 aaPredicted RBP13.8□□□□□ -0.2
CLDN11-206ENST00000486429 HOXA1P49639 335 aaPredicted RBP13.8□□□□□ -0.2
CLDN11-206ENST00000486429 DHODHQ02127 395 aa13.8□□□□□ -0.2
CLDN11-206ENST00000486429 FAM219AQ8IW50 185 aa13.8□□□□□ -0.2
CLDN11-206ENST00000486429 CHRDL1Q9BU40 450 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms