RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TGOLN2O43493 480 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 IGKV1-39P01597 117 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 IGKV1D-39P04432 117 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 CLEC3BP05452 202 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 FOLR2P14207 255 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 CD81P60033 236 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 GUCA2BQ16661 112 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 CD300EQ496F6 205 aaPredicted RBP9.78□□□□□ -0.84
CHMP3-208ENST00000486404 UBAC2Q8NBM4 344 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 MCFD2Q8NI22 146 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 CACNG8Q8WXS5 425 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 TP53RKQ96S44 253 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 TUBA4BQ9H853 241 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 ZMAT4Q9H898 229 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 SLC2A8Q9NY64 477 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 TECRQ9NZ01 308 aaKnown RBP9.78□□□□□ -0.84
CHMP3-208ENST00000486404 RSL24D1Q9UHA3 163 aaKnown RBP9.78□□□□□ -0.84
CHMP3-208ENST00000486404 DMRT1Q9Y5R6 373 aa9.78□□□□□ -0.84
CHMP3-208ENST00000486404 IGHV3-21A0A0B4J1V1 117 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 IZUMO1RA6ND01 250 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 DBX1A6NMT0 343 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 CTDSPLO15194 276 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 B3GALNT1O75752 331 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 CTSDP07339 412 aaPredicted RBP9.77□□□□□ -0.85
CHMP3-208ENST00000486404 PRCDQ00LT1 54 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 Q56UQ5 140 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 SBSPONQ8IVN8 264 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 OR4C16Q8NGL9 310 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 OR1P1Q8NH06 330 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 RRNAD1Q96FB5 475 aaKnown RBP9.77□□□□□ -0.85
CHMP3-208ENST00000486404 MISP3Q96FF7 219 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 BSCL2Q96G97 398 aaPredicted RBP9.77□□□□□ -0.85
CHMP3-208ENST00000486404 PRRT1Q99946 306 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 C21orf62Q9NYP8 219 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 UFC1Q9Y3C8 167 aa9.77□□□□□ -0.85
CHMP3-208ENST00000486404 IGHV3-35A0A0C4DH35 117 aa9.76□□□□□ -0.85
CHMP3-208ENST00000486404 TEX13DA0A0J9YY54 714 aaPredicted RBP9.76□□□□□ -0.85
CHMP3-208ENST00000486404 TMEM213A2RRL7 107 aa9.76□□□□□ -0.85
CHMP3-208ENST00000486404 EDN2P20800 178 aa9.76□□□□□ -0.85
CHMP3-208ENST00000486404 HOXA1P49639 335 aaPredicted RBP9.76□□□□□ -0.85
CHMP3-208ENST00000486404 SURF2Q15527 256 aaPredicted RBP9.76□□□□□ -0.85
CHMP3-208ENST00000486404 SPINK9Q5DT21 86 aa9.76□□□□□ -0.85
CHMP3-208ENST00000486404 ZNF57Q68EA5 555 aaPredicted RBP9.76□□□□□ -0.85
CHMP3-208ENST00000486404 SPSB3Q6PJ21 355 aa9.76□□□□□ -0.85
CHMP3-208ENST00000486404 RCHY1Q96PM5 261 aa9.76□□□□□ -0.85
CHMP3-208ENST00000486404 SLIRPQ9GZT3 109 aaKnown RBP9.76□□□□□ -0.85
CHMP3-208ENST00000486404 ENY2Q9NPA8 101 aa9.76□□□□□ -0.85
CHMP3-208ENST00000486404 MCUBQ9NWR8 336 aa9.76□□□□□ -0.85
CHMP3-208ENST00000486404 FABP12A6NFH5 140 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 IFNA17P01571 189 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 IGKV1-5P01602 117 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 CBLN1P23435 193 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 MFAP2P55001 183 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 HSPE1P61604 102 aaKnown RBP9.75□□□□□ -0.85
CHMP3-208ENST00000486404 ERHP84090 104 aaKnown RBP9.75□□□□□ -0.85
CHMP3-208ENST00000486404 DEFB114Q30KQ6 69 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 SP6Q3SY56 376 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 BTNL8Q6UX41 500 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 ADAMTSL5Q6ZMM2 481 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 Q8N1Y9 231 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 OR2C3Q8N628 320 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 SCARB1Q8WTV0 552 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 TMEM190Q8WZ59 177 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 MARC2Q969Z3 335 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 ATP6V0BQ99437 205 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 NEURL2Q9BR09 285 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 NAA60Q9H7X0 242 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 GAR1Q9NY12 217 aaKnown RBP9.75□□□□□ -0.85
CHMP3-208ENST00000486404 SCP2D1Q9UJQ7 156 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 DNAH9Q9NYC9 4486 aa9.75□□□□□ -0.85
CHMP3-208ENST00000486404 A8MZ25 164 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 GSTZ1O43708 216 aaPredicted RBP9.74□□□□□ -0.85
CHMP3-208ENST00000486404 OR5AC1P0C628 307 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 UCP1P25874 307 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 S100A5P33763 92 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 FAUP35544 74 aaKnown RBP9.74□□□□□ -0.85
CHMP3-208ENST00000486404 SNCAP37840 140 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 IZUMO4Q1ZYL8 232 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 TM4SF20Q53R12 229 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 UNQ9165/PRO28630Q6UXU0 137 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 SLC16A13Q7RTY0 426 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 UXS1Q8NBZ7 420 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 ZNF114Q8NC26 417 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 OR51S1Q8NGJ8 323 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 PINX1Q96BK5 328 aaKnown RBP9.74□□□□□ -0.85
CHMP3-208ENST00000486404 WDR89Q96FK6 387 aaPredicted RBP9.74□□□□□ -0.85
CHMP3-208ENST00000486404 THAP7Q9BT49 309 aaPredicted RBP9.74□□□□□ -0.85
CHMP3-208ENST00000486404 C20orf24Q9BUV8 137 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 TMEM222Q9H0R3 208 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 DAZ1Q9NQZ3 744 aaKnown RBP9.74□□□□□ -0.85
CHMP3-208ENST00000486404 SELENOKQ9Y6D0 94 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 CEPT1Q9Y6K0 416 aa9.74□□□□□ -0.85
CHMP3-208ENST00000486404 ANKRD20A5PA0PJZ0 165 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 K7EIM0 57 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 NDUFA4O00483 81 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 NUPL2O15504 423 aaKnown RBP9.73□□□□□ -0.85
CHMP3-208ENST00000486404 ST8SIA3O43173 380 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 TNFSF8P32971 234 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 ELLP55199 621 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms