RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ZNF502Q8TBZ5 544 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 LSM10Q969L4 123 aaKnown RBP5.31□□□□□ -1.56
VPS50-218ENST00000485994 MARC2Q969Z3 335 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 CCDC140Q96MF4 163 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 SOSTQ9BQB4 213 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 SLIRPQ9GZT3 109 aaKnown RBP5.31□□□□□ -1.56
VPS50-218ENST00000485994 ZC4H2Q9NQZ6 224 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 CCDC59Q9P031 241 aaKnown RBP5.31□□□□□ -1.56
VPS50-218ENST00000485994 EXTL2Q9UBQ6 330 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 F11RQ9Y624 299 aaKnown RBP5.31□□□□□ -1.56
VPS50-218ENST00000485994 U3KQK5 164 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 TRAV25A0A0B4J276 109 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 C2orf70A6NJV1 201 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 C15orf61A6NNL5 157 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 ZNF701M0R085 212 aaPredicted RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 GSTZ1O43708 216 aaPredicted RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 HLA-AP01891 365 aaKnown RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 P0C879 139 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 OR13C7P0DN81 318 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 MYOD1P15172 320 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 CBLN1P23435 193 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 FCGR2BP31994 310 aaPredicted RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 G6PCP35575 357 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 ARL3P36405 182 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 HSPE1P61604 102 aaKnown RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 DEFA5Q01523 94 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 MEF2DQ14814 521 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 STEAP1BQ6NZ63 245 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 CLEC19AQ6UXS0 136 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 LINC00322Q6ZN03 302 aaPredicted RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 H2BFWTQ7Z2G1 175 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 ZNF114Q8NC26 417 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 OR10W1Q8NGF6 305 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 OR1P1Q8NH06 330 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 SMIM4Q8WVI0 70 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 TXN2Q99757 166 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 ZNF436Q9C0F3 470 aaPredicted RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 GAR1Q9NY12 217 aaKnown RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 MRPL27Q9P0M9 148 aaKnown RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 RSL24D1Q9UHA3 163 aaKnown RBP5.3□□□□□ -1.56
VPS50-218ENST00000485994 GPR132Q9UNW8 380 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 OR51B2Q9Y5P1 312 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 NBEAL2Q6ZNJ1 2754 aa5.3□□□□□ -1.56
VPS50-218ENST00000485994 C3orf85A0A1B0GTC6 90 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 PPP5D1E7EU14 171 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 K7EMT4 169 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 M0QYG6 137 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 RGS5O15539 181 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 CDS2O95674 445 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 RAB3DO95716 219 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 CTSDP07339 412 aaPredicted RBP5.29□□□□□ -1.56
VPS50-218ENST00000485994 FRMD6-AS1P0C7T7 363 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 IGHV4-30-4P0DP06 118 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 FOLR2P14207 255 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 UCP1P25874 307 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 PIGPP57054 158 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 PRCDQ00LT1 54 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 AARDQ4LEZ3 155 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 PHLDA2Q53GA4 152 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 PVRIGQ6DKI7 326 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 C11orf87Q6NUJ2 197 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 SLC25A24Q6NUK1 477 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 C19orf35Q6ZS72 473 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 FAM219AQ8IW50 185 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 SGPP2Q8IWX5 399 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 OR2C3Q8N628 320 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 CCDC71LQ8N9Z2 235 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 OR4A16Q8NH70 328 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 DEDD2Q8WXF8 326 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 BSCL2Q96G97 398 aaPredicted RBP5.29□□□□□ -1.56
VPS50-218ENST00000485994 DIRAS2Q96HU8 199 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 TM2D3Q9BRN9 247 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 PALMDQ9NP74 551 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 SLC2A8Q9NY64 477 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 CACFD1Q9UGQ2 172 aa5.29□□□□□ -1.56
VPS50-218ENST00000485994 A0A0B4J293 547 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 TEX13DA0A0J9YY54 714 aaPredicted RBP5.28□□□□□ -1.56
VPS50-218ENST00000485994 ANKRD20A5PA0PJZ0 165 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 TMEM213A2RRL7 107 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 IZUMO1RA6ND01 250 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 MFSD2BA6NFX1 497 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 DISC1C4P0D8 188 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 C3orf84H3BNL1 204 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 K7EIM0 57 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 NDUFA4O00483 81 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 REG1AP05451 166 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 CTSGP08311 255 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 AKAIN1P0CW23 69 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 PGAM2P15259 253 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 MFAP2P55001 183 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 ERHP84090 104 aaKnown RBP5.28□□□□□ -1.56
VPS50-218ENST00000485994 DHODHQ02127 395 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 CD300EQ496F6 205 aaPredicted RBP5.28□□□□□ -1.56
VPS50-218ENST00000485994 PLET1Q6UQ28 207 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 GTSCR1Q86UQ5 136 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 OR4D10Q8NGI6 311 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 OR52E5Q8NH55 327 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 SCARB1Q8WTV0 552 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms