RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 PRSS27Q9BQR3 290 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 REG4Q9BYZ8 158 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 DPY30Q9C005 99 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 POLR2J3Q9H1A7 115 aaKnown RBP3.53□□□□□ -1.84
RTN4-213ENST00000485749 ATG5Q9H1Y0 275 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 TMEM133Q9H2Q1 129 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 LIME1Q9H400 295 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 RPRMQ9NS64 109 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 FKBP11Q9NYL4 201 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 ZNF226Q9NYT6 803 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 PCTPQ9UKL6 214 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 ANAPC10Q9UM13 185 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 PROCRQ9UNN8 238 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 HEBP2Q9Y5Z4 205 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 ITGB4P16144 1822 aa3.53□□□□□ -1.84
RTN4-213ENST00000485749 DOT1LQ8TEK3 1739 aa3.53□□□□□ -1.85
RTN4-213ENST00000485749 IGHV1-69-2A0A0G2JMI3 117 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 LOC107984640A0A0U1RRK4 108 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 TCRBV3S1A0A5B6 114 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 C12orf77C9JDV5 145 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 F5H5P2 479 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 ISLRO14498 428 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 IFITM1P13164 125 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 OR10J1P30954 320 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 CRADDP78560 199 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 CATR1Q13166 79 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 PDGFRLQ15198 375 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 CST6Q15828 149 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 Q5BKY6 102 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 KLF17Q5JT82 389 aaPredicted RBP3.52□□□□□ -1.85
RTN4-213ENST00000485749 UBE2NLQ5JXB2 153 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 HES3Q5TGS1 186 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 NXNL2Q5VZ03 156 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 MORN3Q6PF18 240 aaPredicted RBP3.52□□□□□ -1.85
RTN4-213ENST00000485749 Q6Q795 121 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 Q6ZRU5 148 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 FOXL2NBQ6ZUU3 175 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 VN1R4Q7Z5H5 301 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 NR2C2APQ86WQ0 139 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 ZCCHC24Q8N2G6 241 aaKnown RBP3.52□□□□□ -1.85
RTN4-213ENST00000485749 PRSS33Q8NF86 280 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 OR11H7Q8NGC8 314 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 OR51H1Q8NH63 302 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 TWIST2Q8WVJ9 160 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 COPS9Q8WXC6 57 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 CCL17Q92583 94 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 POP5Q969H6 163 aaKnown RBP3.52□□□□□ -1.85
RTN4-213ENST00000485749 C18orf12Q96KH6 178 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 TEX37Q96LM6 180 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 ERMAPQ96PL5 475 aaPredicted RBP3.52□□□□□ -1.85
RTN4-213ENST00000485749 CIB3Q96Q77 187 aaPredicted RBP3.52□□□□□ -1.85
RTN4-213ENST00000485749 LINC01587Q99440 93 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 ADAT1Q9BUB4 502 aaKnown RBP3.52□□□□□ -1.85
RTN4-213ENST00000485749 TUBA4BQ9H853 241 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 RBM12B-AS1Q9P1G2 102 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 CKLFQ9UBR5 152 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 ZNF629Q9UEG4 869 aaPredicted RBP3.52□□□□□ -1.85
RTN4-213ENST00000485749 CACNG5Q9UF02 275 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 LINC00527Q9UJ94 153 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 RNF11Q9Y3C5 154 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 ENPP4Q9Y6X5 453 aa3.52□□□□□ -1.85
RTN4-213ENST00000485749 FRMPD3Q5JV73 1810 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 IGLV1-36A0A0B4J1U3 117 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 IGKV1D-13A0A0B4J2D9 117 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 FAM220BPB1ANY3 271 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 MRPS14O60783 128 aaKnown RBP3.51□□□□□ -1.85
RTN4-213ENST00000485749 TNFSF13O75888 250 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 TSHBP01222 138 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 TNFP01375 233 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 P0DMU3 169 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 FAM231AP0DMU4 169 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 FAM231CP0DMU5 169 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 IGKV1-13P0DP09 117 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 SDC2P34741 201 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 GABARAPL2P60520 117 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 ENDOGQ14249 297 aaKnown RBP3.51□□□□□ -1.85
RTN4-213ENST00000485749 TMEM183BQ1AE95 376 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 LINC00242Q5T6M2 205 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 C11orf71Q6IPW1 123 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 DNM1P46Q6ZS02 220 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 TRAPPC6BQ86SZ2 158 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 NFE4Q86UQ8 179 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 SLC25A45Q8N413 288 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 ZDHHC22Q8N966 263 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 BPIFB6Q8NFQ5 453 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 GEMIN6Q8WXD5 167 aaKnown RBP3.51□□□□□ -1.85
RTN4-213ENST00000485749 TBL1YQ9BQ87 522 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 NAA38Q9BRA0 125 aaKnown RBP3.51□□□□□ -1.85
RTN4-213ENST00000485749 SNRNP25Q9BV90 132 aaKnown RBP3.51□□□□□ -1.85
RTN4-213ENST00000485749 MRPL32Q9BYC8 188 aaKnown RBP3.51□□□□□ -1.85
RTN4-213ENST00000485749 SRXN1Q9BYN0 137 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 SPRR3Q9UBC9 169 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 SIGLEC7Q9Y286 467 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 AMMECR1Q9Y4X0 333 aaPredicted RBP3.51□□□□□ -1.85
RTN4-213ENST00000485749 NEUROG3Q9Y4Z2 214 aa3.51□□□□□ -1.85
RTN4-213ENST00000485749 RBBP6Q7Z6E9 1792 aaKnown RBP3.51□□□□□ -1.85
RTN4-213ENST00000485749 LOXHD1Q8IVV2 1947 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 GREB1LQ9C091 1923 aaPredicted RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 COL5A3P25940 1745 aaPredicted RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 QSER1Q2KHR3 1735 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms