RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 NXF2Q9GZY0 626 aaKnown RBP10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 MFFQ9GZY8 342 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 MAP6D1Q9H9H5 199 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 CCL28Q9NRJ3 127 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 SULT1C2O00338 296 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 IFNA4P05014 189 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 CTSDP07339 412 aaPredicted RBP10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 FGF2P09038 288 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 FCGR2CP31995 323 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 PRSS3P35030 304 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 CBX5P45973 191 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 POU2AF1Q16633 256 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 SLC25A24Q6NUK1 477 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 OR5AP2Q8NGF4 316 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 CD300LFQ8TDQ1 290 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 GATAD1Q8WUU5 269 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 ABHD1Q96SE0 405 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 RARRES2Q99969 163 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 SCPEP1Q9HB40 452 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 TMEM140Q9NV12 185 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 EXTL2Q9UBQ6 330 aa10.14□□□□□ -0.79
SMARCD3-211ENST00000485592 TRAV3A0A0B4J244 114 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 MPTX1A8MV57 137 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 FAM25AB3EWG3 89 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 FAM25CB3EWG5 89 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 FAM25GB3EWG6 89 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 K7EMT4 169 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 ZNF701M0R085 212 aaPredicted RBP10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 NOL3O60936 208 aaKnown RBP10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 S1PR2O95136 353 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 PPYP01298 95 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 SERPINE2P07093 398 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 TRAPPC2P0DI81 140 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 TRAPPC2BP0DI82 140 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 CMC4P56277 68 aaPredicted RBP10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 RBMS2Q15434 407 aaKnown RBP10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 LYSMD2Q8IV50 215 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 OR10W1Q8NGF6 305 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 C11orf45Q8TAV5 145 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 ATP6V0BQ99437 205 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 SLC5A7Q9GZV3 580 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 CSTL1Q9H114 145 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 IFT46Q9NQC8 304 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 C21orf62Q9NYP8 219 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 FBXL17Q9UF56 701 aa10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 RSL24D1Q9UHA3 163 aaKnown RBP10.13□□□□□ -0.79
SMARCD3-211ENST00000485592 C15orf62A8K5M9 175 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 ZNF207O43670 478 aaKnown RBP10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 OR13C7P0DN81 318 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 FXYD4P59646 89 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 ERVK-16P61578 105 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 Q56UQ5 140 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 AADACL3Q5VUY0 350 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 UBAC2Q8NBM4 344 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 OR51H1Q8NH63 302 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 OR52I2Q8NH67 350 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 C11orf68Q9H3H3 251 aaKnown RBP10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 PLEKHA2Q9HB19 425 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 COMMD9Q9P000 198 aa10.12□□□□□ -0.79
SMARCD3-211ENST00000485592 IGHV3OR16-8A0A075B7F1 116 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 IGHV3-21A0A0B4J1V1 117 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 SMIM31A0A1B0GVY4 71 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 RGS5O15539 181 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 HRH1P35367 487 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 RFX2P48378 723 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 TCTAP57738 103 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 NANOS2P60321 138 aaKnown RBP10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 RELQ04864 619 aaPredicted RBP10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 WT1-ASQ06250 92 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 RNASE12Q5GAN4 147 aaKnown RBP10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 OR1L8Q8NGR8 309 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 C2CD4CQ8TF44 421 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 GIMAP1Q8WWP7 306 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 LSM10Q969L4 123 aaKnown RBP10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 CHRDL1Q9BU40 450 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 EHFQ9NZC4 300 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 KLK11Q9UBX7 282 aa10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 F11RQ9Y624 299 aaKnown RBP10.11□□□□□ -0.79
SMARCD3-211ENST00000485592 HERC2O95714 4834 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 TEX50A0A1B0GTY4 177 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 CCDC160A6NGH7 325 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 PMP2P02689 132 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 HLA-DMAP28067 261 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 RCVRNP35243 200 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 TFPI2P48307 235 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 TAS2R46P59540 309 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 ZNF818PQ6ZRF7 136 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 TMEM17Q86X19 198 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 OR11H2Q8NH07 326 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 SCARB1Q8WTV0 552 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 BORCS5Q969J3 196 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 RNF2Q99496 336 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 SOSTQ9BQB4 213 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 HINT2Q9BX68 163 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 FXYD6Q9H0Q3 95 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 MTFP1Q9UDX5 166 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 SMPXQ9UHP9 88 aa10.1□□□□□ -0.79
SMARCD3-211ENST00000485592 IGHV7-4-1A0A0J9YVY3 117 aa10.09□□□□□ -0.79
SMARCD3-211ENST00000485592 MARCH11A6NNE9 402 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms