RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CTRB2Q6GPI1 263 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 CEMP1Q6PRD7 247 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-227ENST00000485102 UXS1Q8NBZ7 420 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 OR2A7Q96R45 310 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 HERC2O95714 4834 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 TRBV7-1A0A0A6YYK4 115 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 A0A1B0GW64 132 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 UBE2CO00762 179 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 ATG12O94817 140 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 KBTBD11O94819 623 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 ELLP55199 621 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-227ENST00000485102 RPL30P62888 115 aaKnown RBP9.7□□□□□ -0.86
HDAC6-227ENST00000485102 EIF4EBP1Q13541 118 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-227ENST00000485102 TM4SF20Q53R12 229 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 RNASE12Q5GAN4 147 aaKnown RBP9.7□□□□□ -0.86
HDAC6-227ENST00000485102 MZT2BQ6NZ67 158 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 CLEC19AQ6UXS0 136 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 KCTD9Q7L273 389 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 SECTM1Q8WVN6 248 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 CACNG8Q8WXS5 425 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 TRIM63Q969Q1 353 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 EEF1AKMT3Q96AZ1 226 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 MCUBQ9NWR8 336 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 MRPL27Q9P0M9 148 aaKnown RBP9.7□□□□□ -0.86
HDAC6-227ENST00000485102 COPZ2Q9P299 210 aa9.7□□□□□ -0.86
HDAC6-227ENST00000485102 C14orf166Q9Y224 244 aaKnown RBP9.7□□□□□ -0.86
HDAC6-227ENST00000485102 KIR2DL5BA0A0G2JN68 375 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 KIR2DL5BA0A0G2JPC4 375 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 CXorf65A6NEN9 183 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 PGAM2P15259 253 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 BRWD1-AS2P59051 145 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 FXYD4P59646 89 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 KLF9Q13886 244 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-227ENST00000485102 SCGB2B2Q4G0G5 96 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 LHFPL1Q86WI0 220 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 KIR2DL5AQ8N109 375 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 OR4S2Q8NH73 311 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 KIR2DL5BQ8NHK3 375 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 CXorf58Q96LI9 332 aa9.69□□□□□ -0.86
HDAC6-227ENST00000485102 DNAH10Q8IVF4 4471 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 IGLV11-55A0A075B6I3 123 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 A0A0J9YWU9 116 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 ZNF320A2RRD8 509 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 RBFOX2O43251 390 aaKnown RBP eCLIP9.68□□□□□ -0.86
HDAC6-227ENST00000485102 CLEC3BP05452 202 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 IL7P13232 177 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 RPA2P15927 270 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 APOC4P55056 127 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 RND3P61587 244 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 RBMS2Q15434 407 aaKnown RBP9.68□□□□□ -0.86
HDAC6-227ENST00000485102 LYG2Q86SG7 212 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 VKORC1L1Q8N0U8 176 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 MFSD4AQ8N468 514 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 OR4C16Q8NGL9 310 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 TSC22D3Q99576 134 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 SPAG8Q99932 426 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-227ENST00000485102 C5orf66Q9H5L9 145 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 KCNIP3Q9Y2W7 256 aa9.68□□□□□ -0.86
HDAC6-227ENST00000485102 KLK5Q9Y337 293 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-227ENST00000485102 M0QYG6 137 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 SPRY2O43597 315 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 SCAF4O95104 1147 aaKnown RBP9.67□□□□□ -0.86
HDAC6-227ENST00000485102 HRASP01112 189 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 CTSDP07339 412 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-227ENST00000485102 FGF2P09038 288 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 ANXA3P12429 323 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 AREGP15514 252 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 TAS2R31P59538 309 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 UBE2MP61081 183 aaKnown RBP9.67□□□□□ -0.86
HDAC6-227ENST00000485102 RPL8P62917 257 aaKnown RBP9.67□□□□□ -0.86
HDAC6-227ENST00000485102 EWSR1Q01844 656 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDAC6-227ENST00000485102 BTNL8Q6UX41 500 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 UNQ9165/PRO28630Q6UXU0 137 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 RBPMS2Q6ZRY4 209 aaKnown RBP9.67□□□□□ -0.86
HDAC6-227ENST00000485102 C19orf35Q6ZS72 473 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 OR2C3Q8N628 320 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 OR1L6Q8NGR2 347 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 OR4A5Q8NH83 315 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 SRSF8Q9BRL6 282 aaKnown RBP9.67□□□□□ -0.86
HDAC6-227ENST00000485102 HRASLSQ9HDD0 168 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 BET1LQ9NYM9 111 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 CACFD1Q9UGQ2 172 aa9.67□□□□□ -0.86
HDAC6-227ENST00000485102 IGKV1D-13A0A0B4J2D9 117 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 CGB1A6NKQ9 187 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 TSPAN4O14817 238 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 UPK1BO75841 260 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 IGHV3-23P01764 117 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 IGKV1-13P0DP09 117 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 MYOD1P15172 320 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 GNRHRP30968 328 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 SRPXP78539 464 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 PMS2P11Q13670 270 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 AADACL3Q5VUY0 350 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 CADM3Q8N126 398 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 TMEM217Q8N7C4 229 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 OR51S1Q8NGJ8 323 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 ZNF502Q8TBZ5 544 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 TCTEX1D2Q8WW35 142 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 RNF183Q96D59 192 aa9.66□□□□□ -0.86
HDAC6-227ENST00000485102 ATP6V0BQ99437 205 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms