RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 OR10G7Q8NGN6 311 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 MCFD2Q8NI22 146 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 SRSF12Q8WXF0 261 aaKnown RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 NARS2Q96I59 477 aaKnown RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 ERMAPQ96PL5 475 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 SSBP3Q9BWW4 388 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 MOB1AQ9H8S9 216 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 GMPR2Q9P2T1 348 aaKnown RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 PRNDQ9UKY0 176 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 POLR1DQ9Y2S0 133 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 MALRD1Q5VYJ5 2156 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 C20orf202A1L168 122 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 TSPAN15O95858 294 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 NHLRC4P0CG21 123 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 ZFP36P26651 326 aaKnown RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 RORCP51449 518 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 CAV3P56539 151 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 UBA52P62987 128 aaKnown RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 KLF17Q5JT82 389 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 PIK3CD-AS1Q5SR53 167 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 C12orf73Q69YU5 71 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 LAMTOR1Q6IAA8 161 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 LYG1Q8N1E2 194 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 OR51A2Q8NGJ7 313 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 HES4Q9HCC6 221 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 CADP27708 2225 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 A0A0G2JLM5 398 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 M0R1W7 72 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 LY6HO94772 140 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 C1QBP02746 253 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 PIGPP57054 158 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 EMX1Q04741 257 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-205ENST00000485055 BAXQ07812 192 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF57Q68EA5 555 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-205ENST00000485055 Q6YL49 198 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 NEGR1Q7Z3B1 354 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 OTOSQ8NHW6 89 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 RPUSD4Q96CM3 377 aaKnown RBP4.16□□□□□ -1.74
CCDC39-205ENST00000485055 C2orf48Q96LS8 159 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 SMIM3Q9BZL3 60 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 RNF7Q9UBF6 113 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 V9GYS6 101 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 VPS13CQ709C8 3753 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 C2CD3Q4AC94 2353 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 ARID1AO14497 2285 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 CD300LBA8K4G0 201 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 C15orf62A8K5M9 175 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 SRRM5B3KS81 715 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 M0R135 149 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 CTRLP40313 264 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 GPM6AP51674 278 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 DYNLT3P51808 116 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 HAGHLQ6PII5 290 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-205ENST00000485055 LYPD4Q6UWN0 246 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 DEFB107AQ8IZN7 70 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 PNKDQ8N490 385 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 FAM24BQ8N5W8 94 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 OR2K2Q8NGT1 345 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 ITLN1Q8WWA0 313 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF799Q96GE5 643 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF486Q96H40 463 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-205ENST00000485055 GABARAPL3Q9BY60 117 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 UQCC1Q9NVA1 299 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 ANXA10Q9UJ72 324 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 TRAV38-1A0A0B4J264 116 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 RER1O15258 196 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 CT45A6P0DMU7 189 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 CT45A5P0DMU8 189 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 CT45A7P0DMV0 189 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 GNB3P16520 340 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 RAB5AP20339 215 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 PRKACGP22612 351 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 WNT4P56705 351 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 HIST1H1AQ02539 215 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-205ENST00000485055 GINS1Q14691 196 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 SPRNQ5BIV9 151 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 CT45A1Q5HYN5 189 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 CT45A3Q8NHU0 189 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 OR5P3Q8WZ94 311 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 FAM218AQ96MZ4 157 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 NMNAT3Q96T66 252 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF649Q9BS31 505 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 MRPL27Q9P0M9 148 aaKnown RBP4.16□□□□□ -1.74
CCDC39-205ENST00000485055 C11orf21Q9P2W6 132 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 OR5V1Q9UGF6 321 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 PAM16Q9Y3D7 125 aa4.16□□□□□ -1.74
CCDC39-205ENST00000485055 NOTCH2Q04721 2471 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 RBMY1BA6NDE4 496 aaKnown RBP4.15□□□□□ -1.74
CCDC39-205ENST00000485055 RBMY1EA6NEQ0 496 aaKnown RBP4.15□□□□□ -1.74
CCDC39-205ENST00000485055 RBFOX3A6NFN3 312 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 DIRC3C9JPN6 131 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 J3QRE1 110 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 RBMY1DP0C7P1 496 aaKnown RBP4.15□□□□□ -1.74
CCDC39-205ENST00000485055 RBMY1A1P0DJD3 496 aaKnown RBP4.15□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF823P16415 610 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 RPS19P39019 145 aaKnown RBP4.15□□□□□ -1.74
CCDC39-205ENST00000485055 EMP1P54849 157 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 GNGT1P63211 74 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 CCL8P80075 99 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 PRDX4Q13162 271 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms