RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 OR2T8A6NH00 312 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 MARCH11A6NNE9 402 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 TRAPPC2P0DI81 140 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 TRAPPC2BP0DI82 140 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 C8orf88P0DMB2 117 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 GNRHRP30968 328 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 PRSS3P35030 304 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 ELLP55199 621 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 RNASE12Q5GAN4 147 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 SLC25A24Q6NUK1 477 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 HSD17B13Q7Z5P4 300 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 OR1L8Q8NGR8 309 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 VN1R17PQ8TDU5 208 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 TMEM190Q8WZ59 177 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 DIRAS2Q96HU8 199 aa11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 ZNF2Q9BSG1 426 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 KLK5Q9Y337 293 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB1-208ENST00000484729 IGHV3-21A0A0B4J1V1 117 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PGLYRP1O75594 196 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PMP2P02689 132 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 FGF2P09038 288 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 F2RP25116 425 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 S100A5P33763 92 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 RFX2P48378 723 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 WT1-ASQ06250 92 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 LYG2Q86SG7 212 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 SLC38A6Q8IZM9 456 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 OR2C3Q8N628 320 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 OR5H2Q8NGV7 314 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 LSM10Q969L4 123 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 MOB3AQ96BX8 217 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 SPAG8Q99932 426 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 ZNF436Q9C0F3 470 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 NXF2Q9GZY0 626 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 UBQLN2Q9UHD9 624 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 NSG2Q9Y328 171 aa11.39□□□□□ -0.59
HLA-DQB1-208ENST00000484729 TEX50A0A1B0GTY4 177 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 KRASP01116 189 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 SERPINE2P07093 398 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 LPAR6P43657 344 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 TAS2R46P59540 309 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 IL18Q14116 193 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 UBAC2Q8NBM4 344 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 C15orf40Q8WUR7 153 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 FCAMRQ8WWV6 532 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 BSCL2Q96G97 398 aaPredicted RBP11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 C20orf24Q9BUV8 137 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 FXYD6Q9H0Q3 95 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 C5orf66Q9H5L9 145 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 DAZ1Q9NQZ3 744 aaKnown RBP11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 C21orf62Q9NYP8 219 aa11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 F11RQ9Y624 299 aaKnown RBP11.38□□□□□ -0.59
HLA-DQB1-208ENST00000484729 SNAPC5O75971 98 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 G6PCP35575 357 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 MFAP2P55001 183 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 APOC4P55056 127 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 TNFRSF9Q07011 255 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 LGALS9CQ6DKI2 356 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 CMTM1Q8IZ96 169 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 SCPEP1Q9HB40 452 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 NDUFA4L2Q9NRX3 87 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 ANAPC10Q9UM13 185 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 OR51B2Q9Y5P1 312 aa11.37□□□□□ -0.59
HLA-DQB1-208ENST00000484729 IGHV3OR16-8A0A075B7F1 116 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 NDUFA4O00483 81 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 TSPAN4O14817 238 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 ZNF207O43670 478 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 TNFSF8P32971 234 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 RCVRNP35243 200 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 Q56UQ5 140 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 LAMTOR1Q6IAA8 161 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 SPSB3Q6PJ21 355 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 DHRS11Q6UWP2 260 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 SCARB1Q8WTV0 552 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 CHRDL1Q9BU40 450 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 BATF3Q9NR55 127 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 RABL2AQ9UBK7 228 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 RABL2BQ9UNT1 228 aa11.36□□□□□ -0.59
HLA-DQB1-208ENST00000484729 A6NHS1 94 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 GPR31O00270 319 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PRR20EP86478 221 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PRR20CP86479 221 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PRR20DP86480 221 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PRR20BP86481 221 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PRR20AP86496 221 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PHLDA2Q53GA4 152 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 WFDC3Q8IUB2 231 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 OR6F1Q8NGZ6 308 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 GPX8Q8TED1 209 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 PHLDA1Q8WV24 401 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 TMEM56Q96MV1 263 aa11.35□□□□□ -0.59
HLA-DQB1-208ENST00000484729 FABP12A6NFH5 140 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 OR4C46A6NHA9 309 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 F8W735 103 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 K7EIM0 57 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 SPRY2O43597 315 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 NAT1P18440 290 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 HLA-DMAP28067 261 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms