RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 IGKV3D-11A0A0A0MRZ8 115 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 IRGMA1A4Y4 181 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 GGT3PA6NGU5 568 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 H3BT86 120 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 IFNA1P01562 189 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 FABP1P07148 127 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 BPGMP07738 259 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 MSNP26038 577 aaKnown RBP2.25□□□□□ -2.05
VPS13A-211ENST00000484581 PSMB8P28062 276 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 TPI1P60174 286 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 RAB14P61106 215 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 MEF2BQ02080 365 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-211ENST00000484581 FOXF1Q12946 379 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 MOGQ16653 247 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 Q6Q795 121 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 AGTRAPQ6RW13 159 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 LYZL1Q6UWQ5 148 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 Q6ZS52 159 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 GOLT1AQ6ZVE7 132 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 ZNF767PQ75MW2 155 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 OR5J2Q8NH18 312 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 H1FXQ92522 213 aaKnown RBP2.25□□□□□ -2.05
VPS13A-211ENST00000484581 C2orf50Q96LR7 162 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 Q9BRP9 147 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 BOLA2Q9H3K6 86 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 TP73-AS1Q9UF72 201 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 PYCARDQ9ULZ3 195 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 HHLA3Q9XRX5 114 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 TIMM22Q9Y584 194 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 V9GYQ6 96 aa2.25□□□□□ -2.05
VPS13A-211ENST00000484581 TRAPPC13A5PLN9 417 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 IGHV3-7P01780 117 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 C1QBP02746 253 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 MSMBP08118 114 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 SULT1A3P0DMM9 295 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 SULT1A4P0DMN0 295 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 LGALS3P17931 250 aaKnown RBP2.24□□□□□ -2.05
VPS13A-211ENST00000484581 ERP29P30040 261 aaKnown RBP2.24□□□□□ -2.05
VPS13A-211ENST00000484581 RPL28P46779 137 aaKnown RBP2.24□□□□□ -2.05
VPS13A-211ENST00000484581 EMP1P54849 157 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 ARHGAP11BQ3KRB8 267 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 SLC35E3Q7Z769 313 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 HOPXQ9BPY8 73 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-211ENST00000484581 TVP23BQ9NYZ1 205 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 NAT8Q9UHE5 227 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 TIMM9Q9Y5J7 89 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 NEO1Q92859 1461 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 LTBP2Q14767 1821 aa2.24□□□□□ -2.05
VPS13A-211ENST00000484581 MPDZO75970 2070 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 ZNF106Q9H2Y7 1883 aaKnown RBP2.23□□□□□ -2.05
VPS13A-211ENST00000484581 TRAV7A0A075B6U4 112 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 SDHAF1A6NFY7 115 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 ATG12O94817 140 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 LGALS1P09382 135 aaKnown RBP2.23□□□□□ -2.05
VPS13A-211ENST00000484581 EVX1P49640 407 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 DR1Q01658 176 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 TNFRSF9Q07011 255 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 SPANXN3Q5MJ09 141 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 RPP25LQ8N5L8 163 aaKnown RBP2.23□□□□□ -2.05
VPS13A-211ENST00000484581 OR51T1Q8NGJ9 327 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 SLC25A40Q8TBP6 338 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 FAM172AQ8WUF8 416 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 RASSF5Q8WWW0 418 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 GPR146Q96CH1 333 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 MRPS24Q96EL2 167 aaKnown RBP2.23□□□□□ -2.05
VPS13A-211ENST00000484581 NDUFB11Q9NX14 153 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 CYSLTR1Q9Y271 337 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 UTP11Q9Y3A2 253 aaKnown RBP2.23□□□□□ -2.05
VPS13A-211ENST00000484581 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 ROCK1Q13464 1354 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 PLXND1Q9Y4D7 1925 aa2.23□□□□□ -2.05
VPS13A-211ENST00000484581 PTPRBP23467 1997 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 IGHV3-64A0A075B6Q5 118 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 SIGLEC16A6NMB1 481 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 H7C2G1 150 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 PGRMC1O00264 195 aaKnown RBP2.22□□□□□ -2.05
VPS13A-211ENST00000484581 SMIM17P0DL12 118 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 G6PCP35575 357 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 ZNF80P51504 273 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-211ENST00000484581 CRYBA4P53673 196 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 ZNF90Q03938 601 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 TRIQKQ629K1 86 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 Q8NDZ9 215 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 SLIT2O94813 1529 aa2.22□□□□□ -2.05
VPS13A-211ENST00000484581 KIF1BO60333 1816 aa2.21□□□□□ -2.05
VPS13A-211ENST00000484581 TRAV38-1A0A0B4J264 116 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 TRAV41A0A0B4J266 112 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 BUB1B-PAK6H3BSN5 160 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 SLC22A1O15245 554 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 HMGB3O15347 200 aaKnown RBP2.21□□□□□ -2.06
VPS13A-211ENST00000484581 S1PR2O95136 353 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 CBR1P16152 277 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 FUSP35637 526 aaKnown RBP eCLIP2.21□□□□□ -2.06
VPS13A-211ENST00000484581 OR13C6PQ8NH95 151 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 DNAJC30Q96LL9 226 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 CHST6Q9GZX3 395 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 CENPHQ9H3R5 247 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 RNF122Q9H9V4 155 aa2.21□□□□□ -2.06
VPS13A-211ENST00000484581 PRO2289Q9P1D8 64 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms