RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 UNQ9165/PRO28630Q6UXU0 137 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 GPHB5Q86YW7 130 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 SBSPONQ8IVN8 264 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 CADM3Q8N126 398 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 Q8N402 240 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 UBAC2Q8NBM4 344 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 OR51S1Q8NGJ8 323 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 RNASE11Q8TAA1 199 aaKnown RBP9.3□□□□□ -0.92
MSH5-216ENST00000484309 RTBDNQ9BSG5 229 aaPredicted RBP9.3□□□□□ -0.92
MSH5-216ENST00000484309 SIGLEC8Q9NYZ4 499 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 RABL2AQ9UBK7 228 aaPredicted RBP9.3□□□□□ -0.92
MSH5-216ENST00000484309 RSL24D1Q9UHA3 163 aaKnown RBP9.3□□□□□ -0.92
MSH5-216ENST00000484309 RABL2BQ9UNT1 228 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 U3KQK5 164 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 TENM3Q9P273 2699 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 A0A0G2JRQ6 117 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 TEX13DA0A0J9YY54 714 aaPredicted RBP9.29□□□□□ -0.92
MSH5-216ENST00000484309 ANKRD20A5PA0PJZ0 165 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 TMEM213A2RRL7 107 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 K7EIM0 57 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 LGALS9O00182 355 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 TGOLN2O43493 480 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 GSTZ1O43708 216 aaPredicted RBP9.29□□□□□ -0.92
MSH5-216ENST00000484309 OR5AC1P0C628 307 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 IGHV4-30-4P0DP06 118 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 PRCDQ00LT1 54 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 FAM106AQ4KMX7 169 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 TM4SF20Q53R12 229 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 PLET1Q6UQ28 207 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 SGPP2Q8IWX5 399 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 OR2C3Q8N628 320 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 VN1R17PQ8TDU5 208 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 SCARB1Q8WTV0 552 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 MISP3Q96FF7 219 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 SOSTQ9BQB4 213 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 THAP7Q9BT49 309 aaPredicted RBP9.29□□□□□ -0.92
MSH5-216ENST00000484309 RBM38Q9H0Z9 239 aaKnown RBP9.29□□□□□ -0.92
MSH5-216ENST00000484309 C5orf66Q9H5L9 145 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 NAA60Q9H7X0 242 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 PLEKHA3Q9HB20 300 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 MCUBQ9NWR8 336 aa9.29□□□□□ -0.92
MSH5-216ENST00000484309 STAB2Q8WWQ8 2551 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 IGHV3OR16-8A0A075B7F1 116 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 A0A0B4J293 547 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 ST8SIA3O43173 380 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 IGHV3-48P01763 117 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 P0C879 139 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 NHLRC4P0CG21 123 aaPredicted RBP9.28□□□□□ -0.92
MSH5-216ENST00000484309 CBLN1P23435 193 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 UCP1P25874 307 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 HSPE1P61604 102 aaKnown RBP9.28□□□□□ -0.92
MSH5-216ENST00000484309 GUCA2BQ16661 112 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 DEFB114Q30KQ6 69 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 PYDC2Q56P42 97 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 Q56UQ5 140 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 GTSCR1Q86UQ5 136 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 SLC35G3Q8N808 338 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 LHFPL5Q8TAF8 219 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 WDR89Q96FK6 387 aaPredicted RBP9.28□□□□□ -0.92
MSH5-216ENST00000484309 PRRT1Q99946 306 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 CHRDL1Q9BU40 450 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 C21orf62Q9NYP8 219 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 PRR13Q9NZ81 148 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 GPR132Q9UNW8 380 aa9.28□□□□□ -0.92
MSH5-216ENST00000484309 HUWE1Q7Z6Z7 4374 aaKnown RBP9.27□□□□□ -0.93
MSH5-216ENST00000484309 ZNF785A8K8V0 405 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 A8MWP6 167 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 F8W735 103 aaPredicted RBP9.27□□□□□ -0.93
MSH5-216ENST00000484309 ATG12O94817 140 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 IFNA17P01571 189 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 ETV6P41212 452 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 CD81P60033 236 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 SURF2Q15527 256 aaPredicted RBP9.27□□□□□ -0.93
MSH5-216ENST00000484309 BTNL8Q6UX41 500 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 UXS1Q8NBZ7 420 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 OR2K2Q8NGT1 345 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 OR1P1Q8NH06 330 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 PINX1Q96BK5 328 aaKnown RBP9.27□□□□□ -0.93
MSH5-216ENST00000484309 RRNAD1Q96FB5 475 aaKnown RBP9.27□□□□□ -0.93
MSH5-216ENST00000484309 TMEM222Q9H0R3 208 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 WFDC10AQ9H1F0 79 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 MLXQ9UH92 298 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 V9GYH0 126 aa9.27□□□□□ -0.93
MSH5-216ENST00000484309 CRYM-AS1A6NIL9 109 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 ZNF207O43670 478 aaKnown RBP9.26□□□□□ -0.93
MSH5-216ENST00000484309 MT-CO2P00403 227 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 CD7P09564 240 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 S100A5P33763 92 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 ADMP35318 185 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 HOXA1P49639 335 aaPredicted RBP9.26□□□□□ -0.93
MSH5-216ENST00000484309 ERHP84090 104 aaKnown RBP9.26□□□□□ -0.93
MSH5-216ENST00000484309 ZNF79Q15937 498 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 TMEM268Q5VZI3 342 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 Q6ZRM9 215 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 SELENOHQ8IZQ5 122 aaKnown RBP9.26□□□□□ -0.93
MSH5-216ENST00000484309 TMEM61Q8N0U2 210 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 OR1L6Q8NGR2 347 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 GLYATL2Q8WU03 294 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 TMEM190Q8WZ59 177 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 TMEM230Q96A57 120 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms