RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ZNF418Q8TF45 676 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 C17orf50Q8WW18 174 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 FLYWCH2Q96CP2 140 aaKnown RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 CLEC7AQ9BXN2 247 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 QTRT1Q9BXR0 403 aaKnown RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 HRH4Q9H3N8 390 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 HEYLQ9NQ87 328 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 WASHC3Q9Y3C0 194 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 C15orf61A6NNL5 157 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 RNASEK-C17orf49H0YIS7 233 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 HOXA3O43365 443 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 TSPAN15O95858 294 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 IFNA10P01566 189 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 OR8U8P0C7N1 319 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 ZNF137PP52743 207 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 HSPE1P61604 102 aaKnown RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 PJVKQ0ZLH3 352 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 VMA21Q3ZAQ7 101 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 AARDQ4LEZ3 155 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 PDLIM3Q53GG5 364 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 ANKRD39Q53RE8 183 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 HIST2H2BDQ6DRA6 164 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 OR4A47Q6IF82 309 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 DPPA3Q6W0C5 159 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 TMEM182Q6ZP80 229 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 VKORC1L1Q8N0U8 176 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 BEND2Q8NDZ0 799 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 LFNGQ8NES3 379 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 OR5AN1Q8NGI8 311 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 OR4A5Q8NH83 315 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 NARS2Q96I59 477 aaKnown RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 HARBI1Q96MB7 349 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 PSMG3Q9BT73 122 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 TMEM147Q9BVK8 224 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 MRPL20Q9BYC9 149 aaKnown RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 PARD6GQ9BYG4 376 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 UQCC1Q9NVA1 299 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 FOXA2Q9Y261 457 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 FBN3Q75N90 2809 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 IGHV2-26A0A0B4J1V2 119 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 C17orf112F2Z3M2 114 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 H0YJW9 148 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 M0R1W7 72 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 UPK2O00526 184 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 KBTBD11O94819 623 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 HBE1P02100 147 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 CEACAM3P40198 252 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 LGALS7P47929 136 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 ATP5IP56385 69 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-216ENST00000484087 RPS16P62249 146 aaKnown RBP5.57□□□□□ -1.52
BRCA1-216ENST00000484087 SERF2P84101 59 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 LRRC75BQ2VPJ9 315 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 HLA-DRB5Q30154 266 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 TMEM177Q53S58 311 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 UTF1Q5T230 341 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 PUSL1Q8N0Z8 303 aaKnown RBP5.57□□□□□ -1.52
BRCA1-216ENST00000484087 ZNF709Q8N972 641 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 LY6G5BQ8NDX9 201 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 FAM213BQ8TBF2 198 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 RPEQ96AT9 228 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 RCC1LQ96I51 464 aaKnown RBP5.57□□□□□ -1.52
BRCA1-216ENST00000484087 NABP2Q9BQ15 211 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 PBDC1Q9BVG4 233 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 COMMD5Q9GZQ3 224 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 SH3BGRL3Q9H299 93 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 PLEKHA3Q9HB20 300 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 TREM1Q9NP99 234 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 BET1LQ9NYM9 111 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 TCF19Q9Y242 345 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 ZNF257Q9Y2Q1 563 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 FBXO7Q9Y3I1 522 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 OR51B2Q9Y5P1 312 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 TRRAPQ9Y4A5 3859 aa5.57□□□□□ -1.52
BRCA1-216ENST00000484087 IGHV1-69DA0A0B4J2H0 117 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 UBE2L5PA0A1B0GUS4 154 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 BTBD17A6NE02 478 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 SOX15O60248 233 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 IGHV1-69P01742 117 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 IGHV4-59P01825 116 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 MBP02144 154 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 IFNA4P05014 189 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 COX7A1P24310 79 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 REG1BP48304 166 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 ERHP84090 104 aaKnown RBP5.56□□□□□ -1.52
BRCA1-216ENST00000484087 PEA15Q15121 130 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 SPINK9Q5DT21 86 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 HCP5Q6MZN7 132 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 BTNL8Q6UX41 500 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 ETV3LQ6ZN32 361 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 C11orf42Q8N5U0 333 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 OR5B3Q8NH48 314 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 SPATA3Q8NHX4 192 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 ST6GALNAC6Q969X2 333 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 OR4C12Q96R67 309 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 GGACTQ9BVM4 153 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 HINT2Q9BX68 163 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 WDR61Q9GZS3 305 aaKnown RBP5.56□□□□□ -1.52
BRCA1-216ENST00000484087 TMEM14BQ9NUH8 114 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 ZNRD1Q9P1U0 126 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 TIMM9Q9Y5J7 89 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms