RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CCDC90BQ9GZT6 254 aa4.37□□□□□ -1.71
CSDE1-207ENST00000483407 MAP6D1Q9H9H5 199 aa4.37□□□□□ -1.71
CSDE1-207ENST00000483407 ACOT13Q9NPJ3 140 aa4.37□□□□□ -1.71
CSDE1-207ENST00000483407 SLC2A9Q9NRM0 540 aa4.37□□□□□ -1.71
CSDE1-207ENST00000483407 MRPL27Q9P0M9 148 aaKnown RBP4.37□□□□□ -1.71
CSDE1-207ENST00000483407 MLXQ9UH92 298 aa4.37□□□□□ -1.71
CSDE1-207ENST00000483407 RBMX2Q9Y388 322 aaKnown RBP4.37□□□□□ -1.71
CSDE1-207ENST00000483407 UFC1Q9Y3C8 167 aa4.37□□□□□ -1.71
CSDE1-207ENST00000483407 OR2W1Q9Y3N9 320 aa4.37□□□□□ -1.71
CSDE1-207ENST00000483407 SELENOKQ9Y6D0 94 aa4.37□□□□□ -1.71
CSDE1-207ENST00000483407 COX11Q9Y6N1 276 aa4.37□□□□□ -1.71
CSDE1-207ENST00000483407 IFITM5A6NNB3 132 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 CASQ2O14958 399 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-207ENST00000483407 HLA-DQB1P01920 261 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 ZNF735P0CB33 412 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 AREGP15514 252 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 CTRB1P17538 263 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 GALP22466 123 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 NFYAP23511 347 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-207ENST00000483407 CAMPP49913 170 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 RPL8P62917 257 aaKnown RBP4.36□□□□□ -1.71
CSDE1-207ENST00000483407 FABP5Q01469 135 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 PLA2G7Q13093 441 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 ZNF585BQ52M93 769 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 CTRB2Q6GPI1 263 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 LAMTOR1Q6IAA8 161 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 PLET1Q6UQ28 207 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 SSX9Q7RTT3 188 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 PUSL1Q8N0Z8 303 aaKnown RBP4.36□□□□□ -1.71
CSDE1-207ENST00000483407 OR4A5Q8NH83 315 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 TMEM167AQ8TBQ9 72 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 MGLLQ99685 303 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 SPAG8Q99932 426 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-207ENST00000483407 SRSF8Q9BRL6 282 aaKnown RBP4.36□□□□□ -1.71
CSDE1-207ENST00000483407 ATG5Q9H1Y0 275 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 DCSTAMPQ9H295 470 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 C5orf66Q9H5L9 145 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 HRASLSQ9HDD0 168 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 MSRB1Q9NZV6 116 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 THYN1Q9P016 225 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 SPATA2Q9UM82 520 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 S4R3C0 116 aa4.36□□□□□ -1.71
CSDE1-207ENST00000483407 IGLV11-55A0A075B6I3 123 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 IGKV1D-8A0A087WSZ0 117 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 TRAV1-2A0A0B4J238 106 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 KIR2DL5BA0A0G2JN68 375 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 KIR2DL5BA0A0G2JPC4 375 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 GAGE12JA6NER3 117 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 MFSD2BA6NFX1 497 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 E7EUB6 86 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 CTDSP2O14595 271 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 SCGNO76038 276 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 REG1AP05451 166 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 C8orf88P0DMB2 117 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 HLA-GP17693 338 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 RAB3BP20337 219 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 GPR183P32249 361 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 MFAP4P55083 255 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 OR10A3P58181 314 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 GNG2P59768 71 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 RPL30P62888 115 aaKnown RBP4.35□□□□□ -1.71
CSDE1-207ENST00000483407 KLK9Q2XQG4 91 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 DEFB135Q30KP9 77 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 CDNFQ49AH0 187 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 HACD4Q5VWC8 232 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 CNIH2Q6PI25 160 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 UNQ9165/PRO28630Q6UXU0 137 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 C19orf35Q6ZS72 473 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 PRSS48Q7RTY5 328 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 KIR2DL5AQ8N109 375 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 KIR2DL5BQ8NHK3 375 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 ZNF502Q8TBZ5 544 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 TMEM18Q96B42 140 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 SAT2Q96F10 170 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-207ENST00000483407 QTRT1Q9BXR0 403 aaKnown RBP4.35□□□□□ -1.71
CSDE1-207ENST00000483407 COMMD5Q9GZQ3 224 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 C6orf62Q9GZU0 229 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-207ENST00000483407 DUSP21Q9H596 190 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 BET1LQ9NYM9 111 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 TAS2R8Q9NYW2 309 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 KLK9Q9UKQ9 250 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
CSDE1-207ENST00000483407 IGKV1D-13A0A0B4J2D9 117 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 IGHV3-35A0A0C4DH35 117 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 A0A1B0GW64 132 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 OR4C46A6NHA9 309 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 RBFOX2O43251 390 aaKnown RBP eCLIP4.34□□□□□ -1.71
CSDE1-207ENST00000483407 TGOLN2O43493 480 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 NUDT3O95989 172 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 IGKV1-13P0DP09 117 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 PTBP1P26599 531 aaKnown RBP eCLIP4.34□□□□□ -1.71
CSDE1-207ENST00000483407 OR2B8PP59922 312 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 EWSR1Q01844 656 aaKnown RBP eCLIP4.34□□□□□ -1.71
CSDE1-207ENST00000483407 CATR1Q13166 79 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 TIMM50Q3ZCQ8 353 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 LGALS9CQ6DKI2 356 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 THOC7Q6I9Y2 204 aaKnown RBP4.34□□□□□ -1.71
CSDE1-207ENST00000483407 ZNF367Q7RTV3 350 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 SPAG16Q8N0X2 631 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 RPP25LQ8N5L8 163 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms