RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 OR2C3Q8N628 320 aa12.53□□□□□ -0.4
COL2A1-206ENST00000483376 OR52E5Q8NH55 327 aa12.53□□□□□ -0.4
COL2A1-206ENST00000483376 ATP6V0BQ99437 205 aa12.53□□□□□ -0.4
COL2A1-206ENST00000483376 PEF1Q9UBV8 284 aaKnown RBP12.53□□□□□ -0.4
COL2A1-206ENST00000483376 FBXL7Q9UJT9 491 aa12.53□□□□□ -0.4
COL2A1-206ENST00000483376 PLA2G10O15496 165 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 OR2J3O76001 311 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 INSL3P51460 131 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 CCR6P51684 374 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 EXOSC2Q13868 293 aaKnown RBP12.52□□□□□ -0.41
COL2A1-206ENST00000483376 OXLD1Q5BKU9 147 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 NMSQ5H8A3 153 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 TMED4Q7Z7H5 227 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 OR1P1Q8NH06 330 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 CXorf58Q96LI9 332 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 DMRT1Q9Y5R6 373 aa12.52□□□□□ -0.41
COL2A1-206ENST00000483376 TRBV7-1A0A0A6YYK4 115 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 ST8SIA3O43173 380 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 LYRM1O43325 122 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 REG1AP05451 166 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 ZNF846Q147U1 533 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 IZUMO4Q1ZYL8 232 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 Q6ZRM9 215 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 C19orf35Q6ZS72 473 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 SLC35G3Q8N808 338 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 RNASE11Q8TAA1 199 aaKnown RBP12.51□□□□□ -0.41
COL2A1-206ENST00000483376 VN1R17PQ8TDU5 208 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 HINT2Q9BX68 163 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 PLEKHA3Q9HB20 300 aa12.51□□□□□ -0.41
COL2A1-206ENST00000483376 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-206ENST00000483376 NDUFB8O95169 186 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 SFT2D2O95562 160 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 HOXD3P31249 432 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-206ENST00000483376 RAB25P57735 213 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 SPCS3P61009 180 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 KLF5Q13887 457 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-206ENST00000483376 C9orf66Q5T8R8 295 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 DCUN1D4Q92564 292 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 DLX4Q92988 240 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-206ENST00000483376 EEF1AKMT3Q96AZ1 226 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 GPR146Q96CH1 333 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 PDCD10Q9BUL8 212 aa12.5□□□□□ -0.41
COL2A1-206ENST00000483376 ZMAT5Q9UDW3 170 aaKnown RBP12.5□□□□□ -0.41
COL2A1-206ENST00000483376 OVOL1O14753 267 aa12.49□□□□□ -0.41
COL2A1-206ENST00000483376 SLC25A6P12236 298 aa12.49□□□□□ -0.41
COL2A1-206ENST00000483376 SLURP1P55000 103 aa12.49□□□□□ -0.41
COL2A1-206ENST00000483376 ERHP84090 104 aaKnown RBP12.49□□□□□ -0.41
COL2A1-206ENST00000483376 DEFA5Q01523 94 aa12.49□□□□□ -0.41
COL2A1-206ENST00000483376 PPP1R1AQ13522 171 aa12.49□□□□□ -0.41
COL2A1-206ENST00000483376 REC114Q7Z4M0 266 aa12.49□□□□□ -0.41
COL2A1-206ENST00000483376 CCDC140Q96MF4 163 aa12.49□□□□□ -0.41
COL2A1-206ENST00000483376 CACNG5Q9UF02 275 aa12.49□□□□□ -0.41
COL2A1-206ENST00000483376 PRKDCP78527 4128 aaKnown RBP12.49□□□□□ -0.41
COL2A1-206ENST00000483376 A0A1B0GU03 582 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 BMPR1BO00238 502 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 IFNA17P01571 189 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 TRBV12-3P01733 135 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 SULT1A3P0DMM9 295 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 SULT1A4P0DMN0 295 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 VAMP1P23763 118 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 MECP2P51608 486 aaKnown RBP12.48□□□□□ -0.41
COL2A1-206ENST00000483376 MFAP2P55001 183 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 BSXQ3C1V8 233 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 ACSM6Q6P461 480 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 LYZL2Q7Z4W2 148 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 ZNF502Q8TBZ5 544 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 TMED3Q9Y3Q3 217 aa12.48□□□□□ -0.41
COL2A1-206ENST00000483376 LINC00854A0A1B0GVQ3 168 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 ANKRD34BA5PLL1 514 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 SEC14L6B5MCN3 397 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 UPK1BO75841 260 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 FCGR2BP31994 310 aaPredicted RBP12.47□□□□□ -0.41
COL2A1-206ENST00000483376 ASAH1Q13510 395 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 SMCO1Q147U7 214 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 RPEL1Q2QD12 228 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 ANKRD55Q3KP44 614 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 SLC25A24Q6NUK1 477 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 C1QL4Q86Z23 238 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 SIGLEC8Q9NYZ4 499 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 PRR13Q9NZ81 148 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 TBC1D24Q9ULP9 559 aa12.47□□□□□ -0.41
COL2A1-206ENST00000483376 C9orf170A2RU37 121 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 MFSD2BA6NFX1 497 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 K7EIM0 57 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 CORTO00230 105 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 GGCTO75223 188 aaKnown RBP12.46□□□□□ -0.41
COL2A1-206ENST00000483376 HLA-AP01891 365 aaKnown RBP12.46□□□□□ -0.41
COL2A1-206ENST00000483376 OR4E1P0C645 316 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 DEFA6Q01524 100 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 DHRS2Q13268 280 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 TATDN3Q17R31 274 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 C20orf85Q9H1P6 137 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 HSPB7Q9UBY9 170 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 FLVCR2Q9UPI3 526 aa12.46□□□□□ -0.41
COL2A1-206ENST00000483376 PITX3O75364 302 aa12.45□□□□□ -0.42
COL2A1-206ENST00000483376 TCRBP04435 133 aa12.45□□□□□ -0.42
COL2A1-206ENST00000483376 SUB1P53999 127 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL2A1-206ENST00000483376 MZT2BQ6NZ67 158 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms