RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 C4orf17Q53FE4 359 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 OR4A47Q6IF82 309 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 ABHD12Q8N2K0 398 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 ZNF843Q8N446 348 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 Q8N7P7 452 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 ANAPC16Q96DE5 110 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 NCOR1P1Q9H4R4 102 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 C11orf94C9JXX5 98 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 KIR2DS2P43631 304 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 GALR1P47211 349 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
CHD3-211ENST00000481999 OR51G1Q8NGK1 321 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 RAB1CQ92928 201 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 TMEM204Q9BSN7 226 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 GAL3ST2Q9H3Q3 398 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 HEYLQ9NQ87 328 aaPredicted RBP11.75□□□□□ -0.53
CHD3-211ENST00000481999 PITPNC1Q9UKF7 332 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 IGHV3-72A0A0B4J1Y9 119 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 CDKN1AP38936 164 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 HINT2Q9BX68 163 aa11.75□□□□□ -0.53
CHD3-211ENST00000481999 ABCA1O95477 2261 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 TRAV20A0A0B4J274 112 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 PPP5D1E7EU14 171 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 RRHO14718 337 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 PDE6DO43924 150 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 HRASP01112 189 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 PDZD11Q5EBL8 140 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 ZNF841Q6ZN19 808 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 OR4X1Q8NH49 305 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 OR4S2Q8NH73 311 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 TMEM170AQ8WVE7 144 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 RAB9BQ9NP90 201 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 OPRK1P41145 380 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 VDAC2P45880 294 aaPredicted RBP11.74□□□□□ -0.53
CHD3-211ENST00000481999 DNLZQ5SXM8 178 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 NECAP1Q8NC96 275 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 ITLN2Q8WWU7 325 aaPredicted RBP11.74□□□□□ -0.53
CHD3-211ENST00000481999 GAB2Q9UQC2 676 aa11.74□□□□□ -0.53
CHD3-211ENST00000481999 LRRK2Q5S007 2527 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 A0A1W2PPV4 95 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 ITGB1BP1O14713 200 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 DLX6P56179 175 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 MEF2CQ06413 473 aaPredicted RBP11.73□□□□□ -0.53
CHD3-211ENST00000481999 RITA1Q96K30 269 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 TMEM155Q4W5P6 130 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 OR10X1Q8NGY0 326 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 PFDN5Q99471 154 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 SLC35D1Q9NTN3 355 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 KAAG1Q9UBP8 84 aa11.73□□□□□ -0.53
CHD3-211ENST00000481999 FABP4P15090 132 aa11.72□□□□□ -0.53
CHD3-211ENST00000481999 SRP14P37108 136 aaKnown RBP11.72□□□□□ -0.53
CHD3-211ENST00000481999 FAM3BP58499 235 aaPredicted RBP11.72□□□□□ -0.53
CHD3-211ENST00000481999 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
CHD3-211ENST00000481999 KCNIP2Q9NS61 270 aa11.72□□□□□ -0.53
CHD3-211ENST00000481999 DOPEY1Q5JWR5 2465 aa11.72□□□□□ -0.53
CHD3-211ENST00000481999 PRSS46E5RG02 174 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 J3QR06 171 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 IGHV1-8P0DP01 117 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 NPPCP23582 126 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 THBS3P49746 956 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 TCF19Q9Y242 345 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 E7EUB6 86 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 F6UZH7 168 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 SAA1P0DJI8 122 aaPredicted RBP11.71□□□□□ -0.53
CHD3-211ENST00000481999 FAM209BQ5JX69 171 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 C11orf71Q6IPW1 123 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 TMEM183AQ8IXX5 376 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.71□□□□□ -0.53
CHD3-211ENST00000481999 OR2T10Q8NGZ9 312 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 TXNDC17Q9BRA2 123 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 ELOVL1Q9BW60 279 aa11.71□□□□□ -0.53
CHD3-211ENST00000481999 POLQO75417 2590 aa11.71□□□□□ -0.54
CHD3-211ENST00000481999 A0A1W2PPQ1 181 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 GGCTO75223 188 aaKnown RBP11.7□□□□□ -0.54
CHD3-211ENST00000481999 CD99P14209 185 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 HIST1H1BP16401 226 aaKnown RBP11.7□□□□□ -0.54
CHD3-211ENST00000481999 COX7A1P24310 79 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 CST9LP1Q5W188 147 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 ZNF833PQ6ZTB9 187 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 PACRGQ96M98 296 aaPredicted RBP11.7□□□□□ -0.54
CHD3-211ENST00000481999 MGST2Q99735 147 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 HIST1H2BLQ99880 126 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 C22orf46C9J442 243 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 RNF224P0DH78 156 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 KCNIP4Q6PIL6 250 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 PCGF1Q9BSM1 259 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 GGTLC1Q9BX51 225 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 UBTD1Q9HAC8 227 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 PATZ1Q9HBE1 687 aaKnown RBP11.7□□□□□ -0.54
CHD3-211ENST00000481999 CBLN4Q9NTU7 201 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 PXMP4Q9Y6I8 212 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 FBN2P35556 2912 aa11.7□□□□□ -0.54
CHD3-211ENST00000481999 H0YJW9 148 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 TYMSP04818 313 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 UBE2G2P60604 165 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 GNB1P62873 340 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
CHD3-211ENST00000481999 LINC01551Q86U37 167 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms