RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 CSNK1G2-AS1Q8NCQ2 148 aa10.69□□□□□ -0.7
HDAC6-224ENST00000481929 DUSP18Q8NEJ0 188 aa10.69□□□□□ -0.7
HDAC6-224ENST00000481929 ST8SIA2Q92186 375 aa10.69□□□□□ -0.7
HDAC6-224ENST00000481929 GINS3Q9BRX5 216 aa10.69□□□□□ -0.7
HDAC6-224ENST00000481929 RABAC1Q9UI14 185 aa10.69□□□□□ -0.7
HDAC6-224ENST00000481929 RBFOX2O43251 390 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDAC6-224ENST00000481929 TNFSF12O43508 249 aa10.68□□□□□ -0.7
HDAC6-224ENST00000481929 ATP5HO75947 161 aa10.68□□□□□ -0.7
HDAC6-224ENST00000481929 NQO2P16083 231 aa10.68□□□□□ -0.7
HDAC6-224ENST00000481929 UBE2UQ5VVX9 321 aa10.68□□□□□ -0.7
HDAC6-224ENST00000481929 CYGBQ8WWM9 190 aa10.68□□□□□ -0.7
HDAC6-224ENST00000481929 LSM10Q969L4 123 aaKnown RBP10.68□□□□□ -0.7
HDAC6-224ENST00000481929 RNF167Q9H6Y7 350 aa10.68□□□□□ -0.7
HDAC6-224ENST00000481929 TMEM140Q9NV12 185 aa10.68□□□□□ -0.7
HDAC6-224ENST00000481929 NACAE9PAV3 2078 aa10.68□□□□□ -0.7
HDAC6-224ENST00000481929 DNAH5Q8TE73 4624 aa10.68□□□□□ -0.7
HDAC6-224ENST00000481929 KNCNA6PVL3 124 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 ARL6IP5O75915 188 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 POU2AF1Q16633 256 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 HES5Q5TA89 166 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 DMBX1Q8NFW5 382 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 OR1L8Q8NGR8 309 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 MND1Q9BWT6 205 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 HINT2Q9BX68 163 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 VSIRQ9H7M9 311 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 PSORS1C1Q9UIG5 152 aa10.67□□□□□ -0.7
HDAC6-224ENST00000481929 TEX50A0A1B0GTY4 177 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 EPM2AB3EWF7 344 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 HPRT1P00492 218 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 SPART-AS1P0CW21 52 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 MFAP4P55083 255 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 CNIH2Q6PI25 160 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 C6orf223Q8N319 242 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 LILRB2Q8N423 598 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 TMEM203Q969S6 136 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 NXF2Q9GZY0 626 aaKnown RBP10.66□□□□□ -0.7
HDAC6-224ENST00000481929 V9GY05 133 aa10.66□□□□□ -0.7
HDAC6-224ENST00000481929 IGHV3-66A0A0C4DH42 116 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 METTL21EPA6NDL7 271 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 APOHP02749 345 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-224ENST00000481929 ZNF688P0C7X2 276 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 INAFM2P0DMQ5 153 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 FAM3BP58499 235 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-224ENST00000481929 CATR1Q13166 79 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 ARL6IP1Q15041 203 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 ACTL10Q5JWF8 245 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 STXBP6Q8NFX7 210 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 SECTM1Q8WVN6 248 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 GRAMD2BQ96HH9 432 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 TXN2Q99757 166 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 DCSTAMPQ9H295 470 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 TMEM231Q9H6L2 316 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 NDUFA4L2Q9NRX3 87 aa10.65□□□□□ -0.7
HDAC6-224ENST00000481929 ELF5Q9UKW6 265 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-224ENST00000481929 K7EQG2 157 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 SULT1C2O00338 296 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 RAB6AP20340 208 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 CALRP27797 417 aaKnown RBP10.64□□□□□ -0.71
HDAC6-224ENST00000481929 RCN1Q15293 331 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 SPHARQ15513 63 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 MSMO1Q15800 293 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 TMEM91Q6ZNR0 172 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 SPATA12Q7Z6I5 190 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 PQLC1Q8N2U9 271 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 UFD1Q92890 307 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 SLC25A46Q96AG3 418 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 C1QTNF4Q9BXJ3 329 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 CCL28Q9NRJ3 127 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 TMED3Q9Y3Q3 217 aa10.64□□□□□ -0.71
HDAC6-224ENST00000481929 TMEM189A5PLL7 270 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 GNG7O60262 68 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 EMP1P54849 157 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 ERVK-16P61578 105 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 TOMM20LQ6UXN7 152 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 C10orf67Q8IYJ2 551 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 ZBTB34Q8NCN2 500 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 BPIFB6Q8NFQ5 453 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 OR1P1Q8NH06 330 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 MISP3Q96FF7 219 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 PLEKHA2Q9HB19 425 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 PLCXD1Q9NUJ7 323 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 COMMD9Q9P000 198 aa10.63□□□□□ -0.71
HDAC6-224ENST00000481929 NBDYA0A0U1RRE5 68 aa10.62□□□□□ -0.71
HDAC6-224ENST00000481929 TEX48A0A1B0GUV7 120 aa10.62□□□□□ -0.71
HDAC6-224ENST00000481929 HTN3P15516 51 aa10.62□□□□□ -0.71
HDAC6-224ENST00000481929 NUTF2P61970 127 aaKnown RBP10.62□□□□□ -0.71
HDAC6-224ENST00000481929 RPS25P62851 125 aaKnown RBP10.62□□□□□ -0.71
HDAC6-224ENST00000481929 CDNFQ49AH0 187 aa10.62□□□□□ -0.71
HDAC6-224ENST00000481929 LAIR2Q6ISS4 152 aa10.62□□□□□ -0.71
HDAC6-224ENST00000481929 TMEM56Q96MV1 263 aa10.62□□□□□ -0.71
HDAC6-224ENST00000481929 YTHDF1Q9BYJ9 559 aaKnown RBP10.62□□□□□ -0.71
HDAC6-224ENST00000481929 XCL2Q9UBD3 114 aa10.62□□□□□ -0.71
HDAC6-224ENST00000481929 ANXA10Q9UJ72 324 aa10.62□□□□□ -0.71
HDAC6-224ENST00000481929 LSM2Q9Y333 95 aaKnown RBP10.62□□□□□ -0.71
HDAC6-224ENST00000481929 OR51B2Q9Y5P1 312 aa10.62□□□□□ -0.71
HDAC6-224ENST00000481929 I3L2K1 104 aa10.61□□□□□ -0.71
HDAC6-224ENST00000481929 TRAM1Q15629 374 aa10.61□□□□□ -0.71
HDAC6-224ENST00000481929 HACD4Q5VWC8 232 aa10.61□□□□□ -0.71
HDAC6-224ENST00000481929 C8orf59Q8N0T1 100 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-224ENST00000481929 DHRSXQ8N5I4 330 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms