RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 CHD5Q8TDI0 1954 aa0.22□□□□□ -2.37
KDM1A-204ENST00000481879 ALPK2Q86TB3 2170 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 C2orf70A6NJV1 201 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 HTR1AP08908 422 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 STX5Q13190 355 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 GRK1Q15835 563 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 SFXN4Q6P4A7 337 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 ZNF826PQ6ZT77 177 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 C1orf158Q8N1D5 194 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 TMEM156Q8N614 296 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 RAB8BQ92930 207 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 LINC00526Q96FQ7 95 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 TP73-AS1Q9UF72 201 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 C3orf18Q9UK00 162 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 KLK9Q9UKQ9 250 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 GPR98Q8WXG9 6306 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 RP1P56715 2156 aa0.21□□□□□ -2.38
KDM1A-204ENST00000481879 SMARCA4P51532 1647 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 MICAL3Q7RTP6 2002 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 H0Y980 276 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 M0QZ92 97 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 C8orf88P0DMB2 117 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 MARCKSL1P49006 195 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 NAA20P61599 178 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 RNASE10Q5GAN6 216 aaKnown RBP0.2□□□□□ -2.38
KDM1A-204ENST00000481879 COQ5Q5HYK3 327 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 LRRN1Q6UXK5 716 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 CLVS1Q8IUQ0 354 aaPredicted RBP0.2□□□□□ -2.38
KDM1A-204ENST00000481879 OR51D1Q8NGF3 324 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 OR5A1Q8NGJ0 315 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 PFN4Q8NHR9 129 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 ZNF418Q8TF45 676 aaPredicted RBP0.2□□□□□ -2.38
KDM1A-204ENST00000481879 GINS4Q9BRT9 223 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 WDR61Q9GZS3 305 aaKnown RBP0.2□□□□□ -2.38
KDM1A-204ENST00000481879 FGFR1OP2Q9NVK5 253 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 CMTM6Q9NX76 183 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 CKLFQ9UBR5 152 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 WDR90Q96KV7 1748 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 NAV1Q8NEY1 1877 aa0.2□□□□□ -2.38
KDM1A-204ENST00000481879 GLI3P10071 1580 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 TRBV6-8A0A0A6YYG3 113 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 TRAV1-1A0A0B4J248 108 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 LINC00854A0A1B0GVQ3 168 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 FUOMA2VDF0 154 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 M0QX08 132 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 OR1I1O60431 355 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 HYPMO75409 117 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 IGKV1-5P01602 117 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 ZNF25P17030 456 aaPredicted RBP0.19□□□□□ -2.38
KDM1A-204ENST00000481879 TCL1AP56279 114 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 HBA1P69905 142 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 IFITM2Q01629 132 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 MED21Q13503 144 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 PMAIP1Q13794 54 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 PDE6HQ13956 83 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 GDF5OSQ5U4N7 250 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 LPCAT4Q643R3 524 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 FAM151BQ6UXP7 276 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 ALKAL1Q6UXT8 129 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 DPPA3Q6W0C5 159 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 IQCF2Q8IXL9 164 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 PIGXQ8TBF5 258 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 SCGB3A1Q96QR1 104 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 OR51I1Q9H343 314 aa0.19□□□□□ -2.38
KDM1A-204ENST00000481879 USP24Q9UPU5 2620 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 EVC2Q86UK5 1308 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 PTPRBP23467 1997 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 PCDH15Q96QU1 1955 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 M0R2N4 97 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 UBL3O95164 117 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 DEXIO95424 95 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 HIST1H2BOP23527 126 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 HIST1H2BBP33778 126 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 SSR2P43308 183 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 HIST1H2BDP58876 126 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 HIST1H2BCP62807 126 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 HIST2H2BEQ16778 126 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.18□□□□□ -2.38
KDM1A-204ENST00000481879 PDPK2PQ6A1A2 396 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 PHF13Q86YI8 300 aaPredicted RBP0.18□□□□□ -2.38
KDM1A-204ENST00000481879 OR4E2Q8NGC2 313 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 OR4D11Q8NGI4 311 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 MCFD2Q8NI22 146 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 DNAJC9Q8WXX5 260 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 HIST1H2BHQ93079 126 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 HIST1H2BNQ99877 126 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 HIST1H2BMQ99879 126 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 TMEM147Q9BVK8 224 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 XPNPEP1Q9NQW7 623 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 ABCC11Q96J66 1382 aa0.18□□□□□ -2.38
KDM1A-204ENST00000481879 A0A0D9SG52 128 aa0.17□□□□□ -2.38
KDM1A-204ENST00000481879 PQLC2LA1A4F0 135 aa0.17□□□□□ -2.38
KDM1A-204ENST00000481879 EEF1E1-BLOC1S5C9J1V9 151 aa0.17□□□□□ -2.38
KDM1A-204ENST00000481879 CLDN25C9JDP6 229 aa0.17□□□□□ -2.38
KDM1A-204ENST00000481879 APOEP02649 317 aa0.17□□□□□ -2.38
KDM1A-204ENST00000481879 MGST1P10620 155 aaKnown RBP0.17□□□□□ -2.38
KDM1A-204ENST00000481879 UCHL3P15374 230 aa0.17□□□□□ -2.38
KDM1A-204ENST00000481879 DCCP43146 1447 aa0.17□□□□□ -2.38
KDM1A-204ENST00000481879 RHEBQ15382 184 aa0.17□□□□□ -2.38
KDM1A-204ENST00000481879 SPANXN3Q5MJ09 141 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms