RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 SCARB1Q8WTV0 552 aa11.76□□□□□ -0.53
SNRNP200-205ENST00000480835 TMEM147Q9BVK8 224 aa11.76□□□□□ -0.53
SNRNP200-205ENST00000480835 UBQLN2Q9UHD9 624 aa11.76□□□□□ -0.53
SNRNP200-205ENST00000480835 CSPG4Q6UVK1 2322 aa11.76□□□□□ -0.53
SNRNP200-205ENST00000480835 FNDC10F2Z333 226 aa11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 CFDP00746 253 aaPredicted RBP11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 CX3CL1P78423 397 aa11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 BCL6BQ8N143 479 aaPredicted RBP11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 C5orf56Q8N8D9 126 aa11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 ARPC1AQ92747 370 aa11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 PRDM13Q9H4Q3 707 aa11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 SOX21Q9Y651 276 aaPredicted RBP11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 NBPF19A0A087WUL8 3843 aa11.75□□□□□ -0.53
SNRNP200-205ENST00000480835 CCDC168Q8NDH2 2452 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 BTBD17A6NE02 478 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 PRSS46E5RG02 174 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 VWC2Q2TAL6 325 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 PVRIGQ6DKI7 326 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 SLC25A24Q6NUK1 477 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 OR1L6Q8NGR2 347 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 SCGB1C1Q8TD33 95 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 RNASEH2CQ8TDP1 164 aaKnown RBP11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 ABHD5Q8WTS1 349 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 SSMEM1Q8WWF3 244 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 UQCC1Q9NVA1 299 aa11.74□□□□□ -0.53
SNRNP200-205ENST00000480835 HECTD1Q9ULT8 2610 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 ITPR3Q14573 2671 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 IGHV7-81A0A0B4J1V7 117 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 CORTO00230 105 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 SEC11BP0C7V7 166 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 HNF1AP20823 631 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 IER3P46695 156 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 ITPR2Q14571 2701 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 TUSC1Q2TAM9 212 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 ALKAL2Q6UX46 152 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 Q6YL49 198 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 TMEM219Q86XT9 240 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 CACNG8Q8WXS5 425 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 GNPNAT1Q96EK6 184 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 P2RX4Q99571 388 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 YAE1D1Q9NRH1 226 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
SNRNP200-205ENST00000480835 MDFIC2A0A1B0GVS7 189 aa11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 SPP1P10451 314 aa11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 AREGP15514 252 aa11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 GPX4P36969 197 aaPredicted RBP11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 SRP14P37108 136 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 LY6EQ16553 131 aa11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 SPNS3Q6ZMD2 512 aa11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 TMEM68Q96MH6 324 aa11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 F11RQ9Y624 299 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 ASH1LQ9NR48 2969 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-205ENST00000480835 UBE2L5PA0A1B0GUS4 154 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 NPIPB5A8MRT5 1133 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 CYB5BO43169 146 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 CRYGCP07315 174 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 CTRB1P17538 263 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 CD69Q07108 199 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 SCGB2A2Q13296 93 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 CTRB2Q6GPI1 263 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 SGMS2Q8NHU3 365 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 LRRC20Q8TCA0 184 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 TMED6Q8WW62 240 aa11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 WDR61Q9GZS3 305 aaKnown RBP11.71□□□□□ -0.53
SNRNP200-205ENST00000480835 RPS10-NUDT3A0A1W2PQS6 291 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 MPDU1O75352 247 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 IGHV4-59P01825 116 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 AMY1AP04745 511 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 REG1AP05451 166 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 CRIP2P52943 208 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 RAB14P61106 215 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 NDPQ00604 133 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 ETFRF1Q6IPR1 90 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 TTC9CQ8N5M4 171 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 HSD17B11Q8NBQ5 300 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 C22orf15Q8WYQ4 148 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 TAF15Q92804 592 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 SLC25A32Q9H2D1 315 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 NPVFQ9HCQ7 196 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 WDR83OSQ9Y284 106 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 TIMM9Q9Y5J7 89 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 NAV3Q8IVL0 2385 aa11.7□□□□□ -0.54
SNRNP200-205ENST00000480835 FBXO24O75426 580 aa11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 FOSL1P15407 271 aa11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 MDKP21741 143 aaPredicted RBP11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 FGF7P21781 194 aa11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 TMEM86BQ8N661 226 aa11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 SLC35E1Q96K37 410 aa11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 ZNF48Q96MX3 618 aaPredicted RBP11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 FAM103A1Q9BTL3 118 aaKnown RBP11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 WNT10AQ9GZT5 417 aa11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 PARP11Q9NR21 331 aa11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 VPREB3Q9UKI3 123 aa11.69□□□□□ -0.54
SNRNP200-205ENST00000480835 SMCO3A2RU48 225 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms