RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 LOC100506127A0A0U1RQW1 187 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 YIF1AO95070 293 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 CTSGP08311 255 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 TRAPPC2P0DI81 140 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 TRAPPC2BP0DI82 140 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 P0DMU3 169 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 FAM231AP0DMU4 169 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 FAM231CP0DMU5 169 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 RAB3BP20337 219 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 FGF9P31371 208 aaPredicted RBP8.19□□□□□ -1.1
TTC28-206ENST00000480563 TAS2R31P59538 309 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 PAFAH1B2P68402 229 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 WT1-ASQ06250 92 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 LGALS9BQ3B8N2 356 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 Q56UQ5 140 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 LEMD1Q68G75 181 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 ZNF575Q86XF7 245 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 ATG5Q9H1Y0 275 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 DCSTAMPQ9H295 470 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 CCL28Q9NRJ3 127 aa8.19□□□□□ -1.1
TTC28-206ENST00000480563 TXNL4BQ9NX01 149 aaKnown RBP8.19□□□□□ -1.1
TTC28-206ENST00000480563 IGHV3OR16-13A0A075B7E8 117 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 TRAV14DV4A0A0A6YYC5 116 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 IGHV3-74A0A0B4J1X5 117 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 TEX50A0A1B0GTY4 177 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 IFITM5A6NNB3 132 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 K7EIM0 57 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 RBFOX2O43251 390 aaKnown RBP eCLIP8.18□□□□□ -1.1
TTC28-206ENST00000480563 HPRT1P00492 218 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 MIFP14174 115 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 NQO2P16083 231 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 OR10A3P58181 314 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 DEFB131AP59861 70 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 POU2AF1Q16633 256 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 HACD4Q5VWC8 232 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 THOC7Q6I9Y2 204 aaKnown RBP8.18□□□□□ -1.1
TTC28-206ENST00000480563 HSD17B13Q7Z5P4 300 aaPredicted RBP8.18□□□□□ -1.1
TTC28-206ENST00000480563 TPRA1Q86W33 373 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 ZNF414Q96IQ9 312 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 OR10C1Q96KK4 312 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 TMEM140Q9NV12 185 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 ANXA10Q9UJ72 324 aa8.18□□□□□ -1.1
TTC28-206ENST00000480563 F11RQ9Y624 299 aaKnown RBP8.18□□□□□ -1.1
TTC28-206ENST00000480563 ELOA3CA0A087WX78 387 aaPredicted RBP8.17□□□□□ -1.1
TTC28-206ENST00000480563 DEFB131BA0A096LNP1 70 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 SULT1C2O00338 296 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 NUPL2O15504 423 aaKnown RBP8.17□□□□□ -1.1
TTC28-206ENST00000480563 DFFBO76075 338 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 AMBPP02760 352 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 FGF2P09038 288 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 GIG44P09565 113 aaPredicted RBP8.17□□□□□ -1.1
TTC28-206ENST00000480563 RELQ04864 619 aaPredicted RBP8.17□□□□□ -1.1
TTC28-206ENST00000480563 MSMO1Q15800 293 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 TCF24Q7RTU0 167 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 STHQ8IWL8 128 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 DMBX1Q8NFW5 382 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 OR1L8Q8NGR8 309 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 SECTM1Q8WVN6 248 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 DGCR14Q96DF8 476 aaKnown RBP8.17□□□□□ -1.1
TTC28-206ENST00000480563 HINT2Q9BX68 163 aa8.17□□□□□ -1.1
TTC28-206ENST00000480563 NOTOA8MTQ0 251 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 ZNF705EA8MWA4 302 aaPredicted RBP8.16□□□□□ -1.1
TTC28-206ENST00000480563 DNASE2O00115 360 aaPredicted RBP8.16□□□□□ -1.1
TTC28-206ENST00000480563 NOL3O60936 208 aaKnown RBP8.16□□□□□ -1.1
TTC28-206ENST00000480563 CD5P06127 495 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 TMEM41BQ5BJD5 291 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 GPR141Q7Z602 305 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 CROCCP3Q8IVE0 287 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 ZBTB34Q8NCN2 500 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 NUDCD2Q8WVJ2 157 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 GIMAP1Q8WWP7 306 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 LSM10Q969L4 123 aaKnown RBP8.16□□□□□ -1.1
TTC28-206ENST00000480563 NDUFAF3Q9BU61 184 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 MS4A6AQ9H2W1 248 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 NDUFA4L2Q9NRX3 87 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 X6R8D5 127 aa8.16□□□□□ -1.1
TTC28-206ENST00000480563 SSX5O60225 188 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 TMEM127O75204 238 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 SCGNO76038 276 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 SMIM18P0DKX4 95 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 FCGR2CP31995 323 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 MFAP4P55083 255 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 GNG2P59768 71 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 RPL11P62913 178 aaKnown RBP8.15□□□□□ -1.1
TTC28-206ENST00000480563 CATR1Q13166 79 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 C12orf74Q32Q52 190 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 MORN3Q6PF18 240 aaPredicted RBP8.15□□□□□ -1.1
TTC28-206ENST00000480563 ZNF767PQ75MW2 155 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 LILRB2Q8N423 598 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 FAM24BQ8N5W8 94 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 OR13F1Q8NGS4 319 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 SCRT1Q9BWW7 348 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 SLC5A7Q9GZV3 580 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 NXF2Q9GZY0 626 aaKnown RBP8.15□□□□□ -1.1
TTC28-206ENST00000480563 PLEKHA2Q9HB19 425 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 CELA1Q9UNI1 258 aa8.15□□□□□ -1.1
TTC28-206ENST00000480563 IGLV2-18A0A075B6J9 118 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 TRAV2A0A0B4J234 112 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 TMEM235A6NFC5 223 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 ST8SIA3O43173 380 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms