RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SMCO1Q147U7 214 aa9.48□□□□□ -0.89
TRA2B-212ENST00000480461 C12orf45Q8N5I9 185 aaPredicted RBP9.48□□□□□ -0.89
TRA2B-212ENST00000480461 UXS1Q8NBZ7 420 aa9.48□□□□□ -0.89
TRA2B-212ENST00000480461 OR4X2Q8NGF9 303 aa9.48□□□□□ -0.89
TRA2B-212ENST00000480461 OR52E5Q8NH55 327 aa9.48□□□□□ -0.89
TRA2B-212ENST00000480461 COQ8AQ8NI60 647 aa9.48□□□□□ -0.89
TRA2B-212ENST00000480461 SRSF8Q9BRL6 282 aaKnown RBP9.48□□□□□ -0.89
TRA2B-212ENST00000480461 GNB4Q9HAV0 340 aa9.48□□□□□ -0.89
TRA2B-212ENST00000480461 COA4Q9NYJ1 87 aa9.48□□□□□ -0.89
TRA2B-212ENST00000480461 CCSO14618 274 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 NDUFB8O95169 186 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 TSPAN15O95858 294 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 SLC25A6P12236 298 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 CDX1P47902 265 aaPredicted RBP9.47□□□□□ -0.89
TRA2B-212ENST00000480461 SPCS3P61009 180 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 OXA1LQ15070 435 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 NSUN5P1Q3KNT7 163 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 TMEM65Q6PI78 240 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 NDUFA11Q86Y39 141 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 OR2C3Q8N628 320 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 WDR89Q96FK6 387 aaPredicted RBP9.47□□□□□ -0.89
TRA2B-212ENST00000480461 P2RX4Q99571 388 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 ZNF355PQ9NSJ1 428 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 ZFP57Q9NU63 452 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 HSPB7Q9UBY9 170 aa9.47□□□□□ -0.89
TRA2B-212ENST00000480461 TSSC4Q9Y5U2 329 aaPredicted RBP9.47□□□□□ -0.89
TRA2B-212ENST00000480461 IGLV11-55A0A075B6I3 123 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 SNRPGP15A8MWD9 76 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 INS-IGF2F8WCM5 200 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 I3L521 148 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 DHFRP00374 187 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 TRGV3P03979 118 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 TPPP2P59282 170 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 RHOGP84095 191 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 ID3Q02535 119 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 TNFRSF9Q07011 255 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 IL15RAQ13261 267 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 RGS21Q2M5E4 152 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 OR4D5Q8NGN0 318 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 TMEM170AQ8WVE7 144 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 DUX3Q96PT4 197 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 OR5B12Q96R08 314 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 RBKSQ9H477 322 aa9.46□□□□□ -0.9
TRA2B-212ENST00000480461 C7orf66A4D0T2 115 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 H3BUA1 57 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 PRAF2O60831 178 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 OR2J3O76001 311 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 IGHV3-11P01762 117 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 MLANAQ16655 118 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 TATDN3Q17R31 274 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 BEAN1Q3B7T3 259 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 BSXQ3C1V8 233 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 PVRIGQ6DKI7 326 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 ETV3LQ6ZN32 361 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 C8orf86Q6ZUL3 223 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 OR1S1Q8NH92 325 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 MAGT1Q9H0U3 335 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 SLA2Q9H6Q3 261 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 PLEKHA3Q9HB20 300 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 F11RQ9Y624 299 aaKnown RBP9.45□□□□□ -0.9
TRA2B-212ENST00000480461 ALG5Q9Y673 324 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 S4R3C0 116 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 DNAH3Q8TD57 4116 aa9.45□□□□□ -0.9
TRA2B-212ENST00000480461 C13orf42A0A1B0GVH6 325 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 SIX6O95475 246 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 TMEM50AO95807 157 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 IFNA21P01568 189 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 TRBV12-3P01733 135 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 RNASE2P10153 161 aaKnown RBP9.44□□□□□ -0.9
TRA2B-212ENST00000480461 DEFB136Q30KP8 78 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 KHDC1LQ5JSQ8 128 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 THOC7Q6I9Y2 204 aaKnown RBP9.44□□□□□ -0.9
TRA2B-212ENST00000480461 SLC25A24Q6NUK1 477 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 HSD17B13Q7Z5P4 300 aaPredicted RBP9.44□□□□□ -0.9
TRA2B-212ENST00000480461 ZBTB8BQ8NAP8 495 aaPredicted RBP9.44□□□□□ -0.9
TRA2B-212ENST00000480461 NECAP1Q8NC96 275 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 KLHL30-AS1Q8NEE0 82 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 RAX2Q96IS3 184 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 GPN1Q9HCN4 374 aaPredicted RBP9.44□□□□□ -0.9
TRA2B-212ENST00000480461 FBXL7Q9UJT9 491 aa9.44□□□□□ -0.9
TRA2B-212ENST00000480461 PIGBOS1A0A0B4J2F0 54 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 MFSD2BA6NFX1 497 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 CEBPZOSA8MTT3 80 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 G3V4G9 280 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 K7EIM0 57 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 IGHV3-23P01764 117 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 PRB2P02812 416 aaPredicted RBP9.43□□□□□ -0.9
TRA2B-212ENST00000480461 DEFA4P12838 97 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 PAX9P55771 341 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 ERHP84090 104 aaKnown RBP9.43□□□□□ -0.9
TRA2B-212ENST00000480461 RUNX1Q01196 453 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 IAH1Q2TAA2 248 aaPredicted RBP9.43□□□□□ -0.9
TRA2B-212ENST00000480461 C15orf32Q32M92 178 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 ZNF343Q6P1L6 599 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 ZNF114Q8NC26 417 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 OR1P1Q8NH06 330 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 C4orf3Q8WVX3 66 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 USMG5Q96IX5 58 aa9.43□□□□□ -0.9
TRA2B-212ENST00000480461 PDCD10Q9BUL8 212 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms