RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 ZNF503Q96F45 646 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 OSTCQ9NRP0 149 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 BET1LQ9NYM9 111 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 CLCF1Q9UBD9 225 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.02■□□□□ 0.32
COL13A1-208ENST00000479733 NKX6-3A6NJ46 265 aa17.02■□□□□ 0.32
COL13A1-208ENST00000479733 ADH4P08319 380 aa17.02■□□□□ 0.32
COL13A1-208ENST00000479733 CEACAM8P31997 349 aaPredicted RBP17.02■□□□□ 0.32
COL13A1-208ENST00000479733 LYG1Q8N1E2 194 aa17.02■□□□□ 0.32
COL13A1-208ENST00000479733 C18orf32Q8TCD1 76 aa17.02■□□□□ 0.32
COL13A1-208ENST00000479733 SSBP4Q9BWG4 385 aaPredicted RBP17.02■□□□□ 0.32
COL13A1-208ENST00000479733 DUSP13Q9UII6 198 aa17.02■□□□□ 0.32
COL13A1-208ENST00000479733 PRR20EP86478 221 aa17.02■□□□□ 0.31
COL13A1-208ENST00000479733 PRR20CP86479 221 aa17.02■□□□□ 0.31
COL13A1-208ENST00000479733 PRR20DP86480 221 aa17.02■□□□□ 0.31
COL13A1-208ENST00000479733 PRR20BP86481 221 aa17.02■□□□□ 0.31
COL13A1-208ENST00000479733 PRR20AP86496 221 aa17.02■□□□□ 0.31
COL13A1-208ENST00000479733 OR52E5Q8NH55 327 aa17.02■□□□□ 0.31
COL13A1-208ENST00000479733 C22orf15Q8WYQ4 148 aa17.02■□□□□ 0.31
COL13A1-208ENST00000479733 ZNF355PQ9NSJ1 428 aa17.02■□□□□ 0.31
COL13A1-208ENST00000479733 IGHV3OR15-7A0A075B7D8 119 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 MEOX1P50221 254 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 UBE2V1Q13404 147 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 RNASEKQ6P5S7 137 aaKnown RBP17.01■□□□□ 0.31
COL13A1-208ENST00000479733 ZNF738Q8NE65 137 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 LRRC29Q8WV35 223 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 SIT1Q9Y3P8 196 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 COX11Q9Y6N1 276 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 LOC400499M0QZD8 3231 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 M0R2Z0 102 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 PRDX2P32119 198 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 MFAP2P55001 183 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 RPL8P62917 257 aaKnown RBP17.01■□□□□ 0.31
COL13A1-208ENST00000479733 SMIM21Q3B7S5 101 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 AARDQ4LEZ3 155 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 ALKBH2Q6NS38 261 aa17.01■□□□□ 0.31
COL13A1-208ENST00000479733 TECRQ9NZ01 308 aaKnown RBP17.01■□□□□ 0.31
COL13A1-208ENST00000479733 IGLV2-8P01709 118 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 CAMPP49913 170 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 PMS2CLQ68D20 193 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 PRR27Q6MZM9 219 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 EBLN2Q6P2I7 272 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 CXXC4Q9H2H0 198 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 TMEM167BQ9NRX6 74 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 PTPRBP23467 1997 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 ISLRO14498 428 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 CER1O95813 267 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 IGHV1-2P23083 117 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 KLF3P57682 345 aaPredicted RBP17■□□□□ 0.31
COL13A1-208ENST00000479733 OR4A47Q6IF82 309 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 ZNRF1Q8ND25 227 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 IGKV1OR2-108A0A075B7D4 117 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 TRAV5A0A0B4J249 113 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 C19orf35Q6ZS72 473 aa17■□□□□ 0.31
COL13A1-208ENST00000479733 CADP27708 2225 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 IGLL1P15814 213 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 KIR3DL3Q8N743 410 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 ALKBH7Q9BT30 221 aaPredicted RBP16.99■□□□□ 0.31
COL13A1-208ENST00000479733 ARFGEF3Q5TH69 2177 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 A0A1W2PN81 502 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 SMIM27A0A1W2PRY6 76 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 C15orf61A6NNL5 157 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 TNFSF15O95150 251 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 ETFRF1Q6IPR1 90 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 SPACA3Q8IXA5 215 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 IFI27L2Q9H2X8 130 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 RNF24Q9Y225 148 aa16.99■□□□□ 0.31
COL13A1-208ENST00000479733 DUSP3P51452 185 aaPredicted RBP16.98■□□□□ 0.31
COL13A1-208ENST00000479733 HSPE1P61604 102 aaKnown RBP16.98■□□□□ 0.31
COL13A1-208ENST00000479733 PMCHL1Q16048 86 aa16.98■□□□□ 0.31
COL13A1-208ENST00000479733 CLEC5AQ9NY25 188 aa16.98■□□□□ 0.31
COL13A1-208ENST00000479733 MMP23AO75900 390 aa16.98■□□□□ 0.31
COL13A1-208ENST00000479733 SELENOVP59797 346 aa16.98■□□□□ 0.31
COL13A1-208ENST00000479733 OR4C5Q8NGB2 326 aa16.98■□□□□ 0.31
COL13A1-208ENST00000479733 YLPM1P49750 1951 aaKnown RBP16.98■□□□□ 0.31
COL13A1-208ENST00000479733 IZUMO1RA6ND01 250 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 FAM181BA6NEQ2 426 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 FAM90A9PA6NNJ1 464 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 GDF5OSQ5U4N7 250 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 MORN5Q5VZ52 161 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 OR9G1Q8NH87 305 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 PRR7Q8TB68 274 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 SGK494Q96LW2 274 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 HEATR1Q9H583 2144 aaKnown RBP16.97■□□□□ 0.31
COL13A1-208ENST00000479733 LOC105371242A0A075B767 164 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 SH2D7A6NKC9 451 aaPredicted RBP16.97■□□□□ 0.31
COL13A1-208ENST00000479733 VAMP3Q15836 100 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 ABI3Q9P2A4 366 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 ZDBF2Q9HCK1 2354 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 PPOXP50336 477 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 ANKRD39Q53RE8 183 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 OR4S2Q8NH73 311 aa16.97■□□□□ 0.31
COL13A1-208ENST00000479733 TRAV9-2A0A087WT02 112 aa16.96■□□□□ 0.31
COL13A1-208ENST00000479733 FBLN7Q53RD9 439 aa16.96■□□□□ 0.31
COL13A1-208ENST00000479733 SPATA12Q7Z6I5 190 aa16.96■□□□□ 0.31
COL13A1-208ENST00000479733 MRPS16Q9Y3D3 137 aaKnown RBP16.96■□□□□ 0.31
COL13A1-208ENST00000479733 OR51B2Q9Y5P1 312 aa16.96■□□□□ 0.31
COL13A1-208ENST00000479733 IGHV2-26A0A0B4J1V2 119 aa16.96■□□□□ 0.3
COL13A1-208ENST00000479733 TRGV8A0A0C4DH27 118 aa16.96■□□□□ 0.3
COL13A1-208ENST00000479733 M0QZ24 198 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms