RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 GOSR2O14653 212 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 YPEL1O60688 119 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 MMP23AO75900 390 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 IFNA21P01568 189 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 AKAIN1P0CW23 69 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 CGB3P0DN86 165 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 CGB7P0DN87 165 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 IGHV3-43DP0DP04 118 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 IGHV4-38-2P0DP08 117 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 SCGB1A1P11684 91 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 PSMB6P28072 239 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 HTR1DP28221 377 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 RAB7AP51149 207 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 TAS2R46P59540 309 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 SUMO2P61956 95 aaKnown RBP5□□□□□ -1.61
SF3B1-209ENST00000479532 VAMP2P63027 116 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 ACTBL2Q562R1 376 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 KHDC3LQ587J8 217 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 LY6G6FQ5SQ64 297 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 COL5A1-AS1Q5SY13 56 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 MINOS1Q5TGZ0 78 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 DHRS11Q6UWP2 260 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 BRD3OSQ6XYD6 125 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 C9orf139Q6ZV77 190 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 TCF24Q7RTU0 167 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 HOGA1Q86XE5 327 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 C11orf42Q8N5U0 333 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 C8orf31Q8N9H6 132 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 OR11H6Q8NGC7 330 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 OR10V1Q8NGI7 309 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 OR10G4Q8NGN3 311 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 OR1L1Q8NH94 360 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 UBALD1Q8TB05 177 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 BTF3L4Q96K17 158 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 YPEL2Q96QA6 119 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 C20orf144Q9BQM9 153 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 ABHD14AQ9BUJ0 271 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 NECAP2Q9NVZ3 263 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 ZNF230Q9UIE0 474 aaPredicted RBP5□□□□□ -1.61
SF3B1-209ENST00000479532 ANXA10Q9UJ72 324 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 STRAPQ9Y3F4 350 aaKnown RBP5□□□□□ -1.61
SF3B1-209ENST00000479532 RBM7Q9Y580 266 aaKnown RBP5□□□□□ -1.61
SF3B1-209ENST00000479532 MINOS1-NBL1R4GNA1 71 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 ZNF469Q96JG9 3925 aaPredicted RBP5□□□□□ -1.61
SF3B1-209ENST00000479532 WNK2Q9Y3S1 2297 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 TRBV24-1A0A075B6N3 115 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 MEIS3P1A6NDR6 274 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 ODF3BA8MYP8 253 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 OOSP1A8MZH6 123 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 MPPED1O15442 326 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BKO60814 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 TOMM40O96008 361 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BJP06899 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 SCTP09683 121 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 GZMBP10144 247 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BOP23527 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 G0S2P27469 103 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BBP33778 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 SAA4P35542 130 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 RND2P52198 227 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BDP58876 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BCP62807 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 PNRC1Q12796 327 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-209ENST00000479532 FOXE3Q13461 319 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 MADCAM1Q13477 382 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 PSG3Q16557 428 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST2H2BEQ16778 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 ATP6V1FQ16864 119 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HLA-DRB5Q30154 266 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 SCGB2B2Q4G0G5 96 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 MORN2Q502X0 79 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 RNASE12Q5GAN4 147 aaKnown RBP4.99□□□□□ -1.61
SF3B1-209ENST00000479532 KLF17Q5JT82 389 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-209ENST00000479532 RUSC1-AS1Q66K80 236 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 DGAT2L7PQ6IED9 249 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 OR8G2PQ6IF36 304 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 ZNF664Q8N3J9 261 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 LINC00311Q8N616 119 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 ZDHHC22Q8N966 263 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 OR52L2PQ8NGH6 319 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 OR5H2Q8NGV7 314 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 GPX8Q8TED1 209 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BHQ93079 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 TOMM40LQ969M1 308 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 RPEQ96AT9 228 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 ZNF503Q96F45 646 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 IMMP2LQ96T52 175 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BNQ99877 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BMQ99879 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIST1H2BLQ99880 126 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 PRRT1Q99946 306 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 CABLES2Q9BTV7 478 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 SLC2A9Q9NRM0 540 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 LIN7CQ9NUP9 197 aaKnown RBP4.99□□□□□ -1.61
SF3B1-209ENST00000479532 DPM3Q9P2X0 92 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 FLVCR2Q9UPI3 526 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 PSG11Q9UQ72 335 aa4.99□□□□□ -1.61
SF3B1-209ENST00000479532 HIVEP2P31629 2446 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 F8P00451 2351 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms