RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 OR1L6Q8NGR2 347 aa12.96□□□□□ -0.33
ECHDC1-216ENST00000479525 VN1R17PQ8TDU5 208 aa12.96□□□□□ -0.33
ECHDC1-216ENST00000479525 BORCS5Q969J3 196 aa12.96□□□□□ -0.33
ECHDC1-216ENST00000479525 UFC1Q9Y3C8 167 aa12.96□□□□□ -0.33
ECHDC1-216ENST00000479525 IGKV3-7A0A075B6H7 116 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 IGHV3OR16-13A0A075B7E8 117 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 IGHV3-74A0A0B4J1X5 117 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 SMIM31A0A1B0GVY4 71 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 C15orf61A6NNL5 157 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 APOA1P02647 267 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 SMIM18P0DKX4 95 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 ZNF124Q15973 351 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 PINX1Q96BK5 328 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 SEC22AQ96IW7 307 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 SRSF8Q9BRL6 282 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 GGTLC1Q9BX51 225 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 MRPL27Q9P0M9 148 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 KLK11Q9UBX7 282 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 ALMS1Q8TCU4 4167 aa12.95□□□□□ -0.34
ECHDC1-216ENST00000479525 LOC102724200A0A096LPH7 203 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 PGAM2P15259 253 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 RCVRNP35243 200 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 PPP5CP53041 499 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 EWSR1Q01844 656 aaKnown RBP eCLIP12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 OR52I2Q8NH67 350 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 OVOL2Q9BRP0 275 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 TMEM14BQ9NUH8 114 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 PRNDQ9UKY0 176 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 RPL35AP18077 110 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 TFPI2P48307 235 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 THOC7Q6I9Y2 204 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 H2BFWTQ7Z2G1 175 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 OR4D10Q8NGI6 311 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 OR4A16Q8NH70 328 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 BSCL2Q96G97 398 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 EXTL2Q9UBQ6 330 aa12.94□□□□□ -0.34
ECHDC1-216ENST00000479525 CYB5BO43169 146 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 CD3DP04234 171 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 CTSDP07339 412 aaPredicted RBP12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 PMS2P11Q13670 270 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 DEFB135Q30KP9 77 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 GPR107Q5VW38 600 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 OR2C3Q8N628 320 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 MARC2Q969Z3 335 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 TP53RKQ96S44 253 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 SCPEP1Q9HB40 452 aa12.93□□□□□ -0.34
ECHDC1-216ENST00000479525 NDUFA4O00483 81 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 YIF1AO95070 293 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 MT-CO2P00403 227 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 RORCP51449 518 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 ELLP55199 621 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 CTF1Q16619 201 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 ODF3L2Q3SX64 289 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 SP6Q3SY56 376 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 FAAP20Q6NZ36 180 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 APRG1Q8IVJ8 170 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 SLC38A6Q8IZM9 456 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 OR5B3Q8NH48 314 aa12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 DAZ1Q9NQZ3 744 aaKnown RBP12.92□□□□□ -0.34
ECHDC1-216ENST00000479525 I3L2K1 104 aa12.91□□□□□ -0.34
ECHDC1-216ENST00000479525 IGKV1-5P01602 117 aa12.91□□□□□ -0.34
ECHDC1-216ENST00000479525 CTSGP08311 255 aa12.91□□□□□ -0.34
ECHDC1-216ENST00000479525 FGF2P09038 288 aa12.91□□□□□ -0.34
ECHDC1-216ENST00000479525 ANKRD55Q3KP44 614 aa12.91□□□□□ -0.34
ECHDC1-216ENST00000479525 HSD17B13Q7Z5P4 300 aaPredicted RBP12.91□□□□□ -0.34
ECHDC1-216ENST00000479525 RNF2Q99496 336 aa12.91□□□□□ -0.34
ECHDC1-216ENST00000479525 C5orf66Q9H5L9 145 aa12.91□□□□□ -0.34
ECHDC1-216ENST00000479525 TRAV25A0A0B4J276 109 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 IGHV3-66A0A0C4DH42 116 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 A0A0G2JRQ6 117 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 A0A0J9YWU9 116 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 S100GP29377 79 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 PIGPP57054 158 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 PRCDQ00LT1 54 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 RNASE10Q5GAN6 216 aaKnown RBP12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 GBGT1Q8N5D6 347 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 OR1P1Q8NH06 330 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 ABHD1Q96SE0 405 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 TSC22D3Q99576 134 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 FKBP11Q9NYL4 201 aa12.9□□□□□ -0.34
ECHDC1-216ENST00000479525 TSPAN4O14817 238 aa12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 GABARAPO95166 117 aa12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 UCP3P55916 312 aa12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 SCGB2B2Q4G0G5 96 aa12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 MZT2AQ6P582 158 aa12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 SPSB3Q6PJ21 355 aa12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 LHFPL1Q86WI0 220 aa12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 CMTM3Q96MX0 182 aa12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 MIXL1Q9H2W2 232 aa12.89□□□□□ -0.35
ECHDC1-216ENST00000479525 NUPL2O15504 423 aaKnown RBP12.88□□□□□ -0.35
ECHDC1-216ENST00000479525 ST8SIA3O43173 380 aa12.88□□□□□ -0.35
ECHDC1-216ENST00000479525 APOHP02749 345 aaPredicted RBP12.88□□□□□ -0.35
ECHDC1-216ENST00000479525 FCGR2BP31994 310 aaPredicted RBP12.88□□□□□ -0.35
ECHDC1-216ENST00000479525 AKR1C2P52895 323 aa12.88□□□□□ -0.35
ECHDC1-216ENST00000479525 MFAP4P55083 255 aa12.88□□□□□ -0.35
ECHDC1-216ENST00000479525 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
ECHDC1-216ENST00000479525 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms