RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 MICAL3Q7RTP6 2002 aa0.53□□□□□ -2.32
SPC25-204ENST00000479309 NUMA1Q14980 2115 aa0.53□□□□□ -2.32
SPC25-204ENST00000479309 TOPBP1Q92547 1522 aa0.53□□□□□ -2.33
SPC25-204ENST00000479309 TMEM212A6NML5 194 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 INMT-MINDY4F8WBC2 141 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 CLPSP04118 112 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 SHBGP04278 402 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 CALB1P05937 261 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 RNASE3P12724 160 aaKnown RBP0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST1H2BOP23527 126 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST1H2BBP33778 126 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 TCL1AP56279 114 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST1H2BDP58876 126 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST1H2BCP62807 126 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST3H3Q16695 136 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 GUK1Q16774 197 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST2H2BEQ16778 126 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 SPANXN3Q5MJ09 141 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.52□□□□□ -2.33
SPC25-204ENST00000479309 AADACL3Q5VUY0 350 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 TEX36Q5VZQ5 186 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 LPCAT4Q643R3 524 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 SFXN4Q6P4A7 337 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 RPL22L1Q6P5R6 122 aaKnown RBP0.52□□□□□ -2.33
SPC25-204ENST00000479309 DEFB128Q7Z7B8 93 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 IQCF2Q8IXL9 164 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 LRRC25Q8N386 305 aaPredicted RBP0.52□□□□□ -2.33
SPC25-204ENST00000479309 LINC00471Q8N535 108 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 ZNF565Q8N9K5 539 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 C15orf53Q8NAA6 179 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 WFDC11Q8NEX6 87 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 OR4D11Q8NGI4 311 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 OR4C6Q8NH72 309 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST1H2BHQ93079 126 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 ODF3Q96PU9 254 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 SCGB3A1Q96QR1 104 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST1H2BNQ99877 126 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 HIST1H2BMQ99879 126 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 REG4Q9BYZ8 158 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 TRABDQ9H4I3 376 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 TTC21AQ8NDW8 1320 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 RIC1Q4ADV7 1423 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 SNAPC4Q5SXM2 1469 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 MAST2Q6P0Q8 1798 aa0.52□□□□□ -2.33
SPC25-204ENST00000479309 TRAV14DV4A0A0A6YYC5 116 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 EEF1E1-BLOC1S5C9J1V9 151 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 PSMD12O00232 456 aaPredicted RBP0.51□□□□□ -2.33
SPC25-204ENST00000479309 GEMIN2O14893 280 aaKnown RBP0.51□□□□□ -2.33
SPC25-204ENST00000479309 OR5F1O95221 314 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 HTR1AP08908 422 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 CD79AP11912 226 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 PMAIP1Q13794 54 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 ZNF846Q147U1 533 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 KIAA2026Q5HYC2 2103 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 CDKL4Q5MAI5 379 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 HIST2H3PS2Q5TEC6 136 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 LCN15Q6UWW0 184 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 ZNF826PQ6ZT77 177 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 AQP3Q92482 292 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 SLC35B4Q969S0 331 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 OR52E6Q96RD3 313 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 MRPL57Q9BQC6 102 aaKnown RBP0.51□□□□□ -2.33
SPC25-204ENST00000479309 DERL1Q9BUN8 251 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 COMMD5Q9GZQ3 224 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 PRTFDC1Q9NRG1 225 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 CISHQ9NSE2 258 aa0.51□□□□□ -2.33
SPC25-204ENST00000479309 RALGAPA2Q2PPJ7 1873 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 COL4A5P29400 1685 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 M0R036 132 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 TGOLN2O43493 480 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 IGKV1-5P01602 117 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 HIST1H1EP10412 219 aaKnown RBP0.5□□□□□ -2.33
SPC25-204ENST00000479309 SPCS3P61009 180 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 SNRPD2P62316 118 aaKnown RBP0.5□□□□□ -2.33
SPC25-204ENST00000479309 UBE2IP63279 158 aaKnown RBP0.5□□□□□ -2.33
SPC25-204ENST00000479309 HBA1P69905 142 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 OR2F1Q13607 317 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 SPANXN5Q5MJ07 72 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 CCDC122Q5T0U0 273 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 LPCAT3Q6P1A2 487 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 ALKAL1Q6UXT8 129 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 C20orf196Q8IYI0 205 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 OR51D1Q8NGF3 324 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 OR13C4Q8NGS5 318 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 PFN4Q8NHR9 129 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 DDI1Q8WTU0 396 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 GUCA1BQ9UMX6 200 aa0.5□□□□□ -2.33
SPC25-204ENST00000479309 RTTNQ86VV8 2226 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 NUP155O75694 1391 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 DLG5Q8TDM6 1919 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 A0A087WX48 190 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 A0A0D9SG52 128 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 DPRXA6NFQ7 191 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 SMIM23A6NLE4 172 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 IFNA10P01566 189 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 IFNA5P01569 189 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 HLA-DRB1P01911 266 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 TNNC2P02585 160 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 COX6A1P12074 109 aa0.49□□□□□ -2.33
SPC25-204ENST00000479309 BRS3P32247 399 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms