RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PLEKHA3Q9HB20 300 aa15.8■□□□□ 0.12
VARS-224ENST00000479051 KLK9Q9UKQ9 250 aa15.8■□□□□ 0.12
VARS-224ENST00000479051 CCR6P51684 374 aa15.79■□□□□ 0.12
VARS-224ENST00000479051 ERHP84090 104 aaKnown RBP15.79■□□□□ 0.12
VARS-224ENST00000479051 IZUMO4Q1ZYL8 232 aa15.79■□□□□ 0.12
VARS-224ENST00000479051 C9orf66Q5T8R8 295 aa15.79■□□□□ 0.12
VARS-224ENST00000479051 LHFPL5Q8TAF8 219 aa15.79■□□□□ 0.12
VARS-224ENST00000479051 DCUN1D4Q92564 292 aa15.79■□□□□ 0.12
VARS-224ENST00000479051 WDR12Q9GZL7 423 aaKnown RBP15.79■□□□□ 0.12
VARS-224ENST00000479051 ZMAT5Q9UDW3 170 aaKnown RBP15.79■□□□□ 0.12
VARS-224ENST00000479051 CACFD1Q9UGQ2 172 aa15.79■□□□□ 0.12
VARS-224ENST00000479051 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.78■□□□□ 0.12
VARS-224ENST00000479051 A0A0B4J293 547 aa15.78■□□□□ 0.12
VARS-224ENST00000479051 SEC14L6B5MCN3 397 aa15.78■□□□□ 0.12
VARS-224ENST00000479051 NDUFB6O95139 128 aa15.78■□□□□ 0.12
VARS-224ENST00000479051 NDUFB8O95169 186 aa15.78■□□□□ 0.12
VARS-224ENST00000479051 VAMP1P23763 118 aa15.78■□□□□ 0.12
VARS-224ENST00000479051 HOXD3P31249 432 aaPredicted RBP15.78■□□□□ 0.12
VARS-224ENST00000479051 UBE2MP61081 183 aaKnown RBP15.78■□□□□ 0.12
VARS-224ENST00000479051 SUPT4H1P63272 117 aaKnown RBP15.78■□□□□ 0.12
VARS-224ENST00000479051 SLC25A24Q6NUK1 477 aa15.78■□□□□ 0.12
VARS-224ENST00000479051 DLX4Q92988 240 aaPredicted RBP15.78■□□□□ 0.12
VARS-224ENST00000479051 ENY2Q9NPA8 101 aa15.78■□□□□ 0.12
VARS-224ENST00000479051 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.78■□□□□ 0.12
VARS-224ENST00000479051 F11RQ9Y624 299 aaKnown RBP15.78■□□□□ 0.12
VARS-224ENST00000479051 A0A0B4J2A0 478 aa15.77■□□□□ 0.12
VARS-224ENST00000479051 ST8SIA3O43173 380 aa15.77■□□□□ 0.12
VARS-224ENST00000479051 TATDN3Q17R31 274 aa15.77■□□□□ 0.12
VARS-224ENST00000479051 RPEL1Q2QD12 228 aa15.77■□□□□ 0.12
VARS-224ENST00000479051 SHPKQ9UHJ6 478 aa15.77■□□□□ 0.12
VARS-224ENST00000479051 NOTCH1P46531 2555 aa15.77■□□□□ 0.11
VARS-224ENST00000479051 TRBV7-1A0A0A6YYK4 115 aa15.76■□□□□ 0.11
VARS-224ENST00000479051 A0A0G2JRQ6 117 aa15.76■□□□□ 0.11
VARS-224ENST00000479051 HOXA1P49639 335 aaPredicted RBP15.76■□□□□ 0.11
VARS-224ENST00000479051 INSL3P51460 131 aa15.76■□□□□ 0.11
VARS-224ENST00000479051 ZNF846Q147U1 533 aa15.76■□□□□ 0.11
VARS-224ENST00000479051 OR2C3Q8N628 320 aa15.76■□□□□ 0.11
VARS-224ENST00000479051 OR1P1Q8NH06 330 aa15.76■□□□□ 0.11
VARS-224ENST00000479051 GPR146Q96CH1 333 aa15.76■□□□□ 0.11
VARS-224ENST00000479051 CACNG5Q9UF02 275 aa15.76■□□□□ 0.11
VARS-224ENST00000479051 DUXBA0A1W2PPF3 345 aa15.75■□□□□ 0.11
VARS-224ENST00000479051 LYRM1O43325 122 aa15.75■□□□□ 0.11
VARS-224ENST00000479051 SFT2D2O95562 160 aa15.75■□□□□ 0.11
VARS-224ENST00000479051 SULT1A3P0DMM9 295 aa15.75■□□□□ 0.11
VARS-224ENST00000479051 SULT1A4P0DMN0 295 aa15.75■□□□□ 0.11
VARS-224ENST00000479051 SNCAP37840 140 aa15.75■□□□□ 0.11
VARS-224ENST00000479051 REC114Q7Z4M0 266 aa15.75■□□□□ 0.11
VARS-224ENST00000479051 ELOVL1Q9BW60 279 aa15.75■□□□□ 0.11
VARS-224ENST00000479051 PRR13Q9NZ81 148 aa15.75■□□□□ 0.11
VARS-224ENST00000479051 TRBV12-3P01733 135 aa15.74■□□□□ 0.11
VARS-224ENST00000479051 SUB1P53999 127 aaKnown RBP eCLIP15.74■□□□□ 0.11
VARS-224ENST00000479051 SPCS3P61009 180 aa15.74■□□□□ 0.11
VARS-224ENST00000479051 PPP1R1AQ13522 171 aa15.74■□□□□ 0.11
VARS-224ENST00000479051 SPINK9Q5DT21 86 aa15.74■□□□□ 0.11
VARS-224ENST00000479051 Q6ZRM9 215 aa15.74■□□□□ 0.11
VARS-224ENST00000479051 ZNF114Q8NC26 417 aa15.74■□□□□ 0.11
VARS-224ENST00000479051 OR52E5Q8NH55 327 aa15.74■□□□□ 0.11
VARS-224ENST00000479051 VN1R17PQ8TDU5 208 aa15.74■□□□□ 0.11
VARS-224ENST00000479051 INS-IGF2F8WCM5 200 aa15.73■□□□□ 0.11
VARS-224ENST00000479051 PLA2G10O15496 165 aa15.73■□□□□ 0.11
VARS-224ENST00000479051 WIPF1O43516 503 aa15.73■□□□□ 0.11
VARS-224ENST00000479051 GGCTO75223 188 aaKnown RBP15.73■□□□□ 0.11
VARS-224ENST00000479051 IGHV3-23P01764 117 aa15.73■□□□□ 0.11
VARS-224ENST00000479051 BTCP35070 178 aa15.73■□□□□ 0.11
VARS-224ENST00000479051 KLF5Q13887 457 aaPredicted RBP15.73■□□□□ 0.11
VARS-224ENST00000479051 AARDQ4LEZ3 155 aa15.73■□□□□ 0.11
VARS-224ENST00000479051 CLEC19AQ6UXS0 136 aa15.73■□□□□ 0.11
VARS-224ENST00000479051 LYZL2Q7Z4W2 148 aa15.73■□□□□ 0.11
VARS-224ENST00000479051 OR4C12Q96R67 309 aa15.73■□□□□ 0.11
VARS-224ENST00000479051 MFSD2BA6NFX1 497 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 BMPR1BO00238 502 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 SAP30O75446 220 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 ARL3P36405 182 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 SYNJ2BPP57105 145 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 EGFEM1PQ0D2K5 195 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 SMCO1Q147U7 214 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 ACSM6Q6P461 480 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 LRTM2Q8N967 370 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 CCDC140Q96MF4 163 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 DMRT1Q9Y5R6 373 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 S4R3C0 116 aa15.72■□□□□ 0.11
VARS-224ENST00000479051 MEGF8Q7Z7M0 2845 aa15.71■□□□□ 0.11
VARS-224ENST00000479051 HLA-AP01891 365 aaKnown RBP15.71■□□□□ 0.11
VARS-224ENST00000479051 ANKRD55Q3KP44 614 aa15.71■□□□□ 0.11
VARS-224ENST00000479051 NMSQ5H8A3 153 aa15.71■□□□□ 0.11
VARS-224ENST00000479051 MZT2BQ6NZ67 158 aa15.71■□□□□ 0.11
VARS-224ENST00000479051 ZNF502Q8TBZ5 544 aa15.71■□□□□ 0.11
VARS-224ENST00000479051 MISP3Q96FF7 219 aa15.71■□□□□ 0.11
VARS-224ENST00000479051 PEMTQ9UBM1 199 aa15.71■□□□□ 0.11
VARS-224ENST00000479051 FLVCR2Q9UPI3 526 aa15.71■□□□□ 0.11
VARS-224ENST00000479051 A0A1B0GU03 582 aa15.7■□□□□ 0.1
VARS-224ENST00000479051 CEBPZOSA8MTT3 80 aa15.7■□□□□ 0.1
VARS-224ENST00000479051 PPP5D1E7EU14 171 aa15.7■□□□□ 0.1
VARS-224ENST00000479051 CLEC3BP05452 202 aa15.7■□□□□ 0.1
VARS-224ENST00000479051 MFAP2P55001 183 aa15.7■□□□□ 0.1
VARS-224ENST00000479051 C4orf46Q504U0 113 aa15.7■□□□□ 0.1
VARS-224ENST00000479051 PDLIM3Q53GG5 364 aaPredicted RBP15.7■□□□□ 0.1
VARS-224ENST00000479051 OR9G4Q8NGQ1 327 aa15.7■□□□□ 0.1
VARS-224ENST00000479051 COQ8AQ8NI60 647 aa15.7■□□□□ 0.1
VARS-224ENST00000479051 ATP6V0BQ99437 205 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms