RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TRIB1Q96RU8 372 aa17.52■□□□□ 0.4
SDF4-206ENST00000478938 MAP1LC3CQ9BXW4 147 aa17.52■□□□□ 0.4
SDF4-206ENST00000478938 PLA2G2FQ9BZM2 168 aa17.52■□□□□ 0.4
SDF4-206ENST00000478938 ADH4P08319 380 aa17.52■□□□□ 0.39
SDF4-206ENST00000478938 SP9P0CG40 484 aa17.52■□□□□ 0.39
SDF4-206ENST00000478938 RASL11AQ6T310 242 aa17.52■□□□□ 0.39
SDF4-206ENST00000478938 FAM214BQ7L5A3 538 aa17.52■□□□□ 0.39
SDF4-206ENST00000478938 LRRC29Q8WV35 223 aa17.52■□□□□ 0.39
SDF4-206ENST00000478938 POM121L2Q96KW2 1035 aa17.52■□□□□ 0.39
SDF4-206ENST00000478938 OR2H1Q9GZK4 316 aa17.52■□□□□ 0.39
SDF4-206ENST00000478938 TRAPPC2LQ9UL33 140 aa17.52■□□□□ 0.39
SDF4-206ENST00000478938 LAMA1P25391 3075 aa17.51■□□□□ 0.39
SDF4-206ENST00000478938 GGTLC3B5MD39 225 aa17.51■□□□□ 0.39
SDF4-206ENST00000478938 TCTAP57738 103 aa17.51■□□□□ 0.39
SDF4-206ENST00000478938 K7EQM0 130 aa17.51■□□□□ 0.39
SDF4-206ENST00000478938 YPEL5P62699 121 aa17.51■□□□□ 0.39
SDF4-206ENST00000478938 NEU4Q8WWR8 484 aaPredicted RBP17.51■□□□□ 0.39
SDF4-206ENST00000478938 NANOS1Q8WY41 292 aaKnown RBP17.51■□□□□ 0.39
SDF4-206ENST00000478938 FTH1P19P0C7X4 201 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
SDF4-206ENST00000478938 ZNF138P52744 262 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 CEACAM21Q3KPI0 293 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 TRAT1Q6PIZ9 186 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 TMEM116Q8NCL8 245 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 CACNA1DQ01668 2161 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 CHD9Q3L8U1 2897 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 IGFBP2P18065 325 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 TEX45Q8NA69 505 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 OR1L3Q8NH93 324 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 LINC00479Q96M42 142 aa17.5■□□□□ 0.39
SDF4-206ENST00000478938 COLQQ9Y215 455 aaPredicted RBP17.5■□□□□ 0.39
SDF4-206ENST00000478938 VWC2LB2RUY7 222 aa17.49■□□□□ 0.39
SDF4-206ENST00000478938 FGF6P10767 208 aa17.49■□□□□ 0.39
SDF4-206ENST00000478938 CCNOP22674 350 aa17.49■□□□□ 0.39
SDF4-206ENST00000478938 LINC00696Q6ZRV3 163 aa17.49■□□□□ 0.39
SDF4-206ENST00000478938 RNF138Q8WVD3 245 aa17.49■□□□□ 0.39
SDF4-206ENST00000478938 SNRNP40Q96DI7 357 aaKnown RBP17.49■□□□□ 0.39
SDF4-206ENST00000478938 MBD6Q96DN6 1003 aa17.49■□□□□ 0.39
SDF4-206ENST00000478938 PLPPR2Q96GM1 343 aa17.49■□□□□ 0.39
SDF4-206ENST00000478938 MYF5P13349 255 aa17.48■□□□□ 0.39
SDF4-206ENST00000478938 ACP7Q6ZNF0 438 aa17.48■□□□□ 0.39
SDF4-206ENST00000478938 ZNF645Q8N7E2 425 aa17.48■□□□□ 0.39
SDF4-206ENST00000478938 OR2V2Q96R30 315 aa17.48■□□□□ 0.39
SDF4-206ENST00000478938 CEACAM16Q2WEN9 425 aa17.48■□□□□ 0.39
SDF4-206ENST00000478938 ADAMTSL5Q6ZMM2 481 aa17.48■□□□□ 0.39
SDF4-206ENST00000478938 GEMIN7Q9H840 131 aaKnown RBP17.48■□□□□ 0.39
SDF4-206ENST00000478938 DUSP13Q9UII6 198 aa17.48■□□□□ 0.39
SDF4-206ENST00000478938 TNRC6AQ8NDV7 1962 aaKnown RBP17.48■□□□□ 0.39
SDF4-206ENST00000478938 REV3LO60673 3130 aa17.48■□□□□ 0.39
SDF4-206ENST00000478938 EML6Q6ZMW3 1958 aa17.48■□□□□ 0.39
SDF4-206ENST00000478938 IGLV3-32A0A0A0MS00 114 aa17.47■□□□□ 0.39
SDF4-206ENST00000478938 HIGD1CA8MV81 97 aa17.47■□□□□ 0.39
SDF4-206ENST00000478938 ZIC3O60481 467 aa17.47■□□□□ 0.39
SDF4-206ENST00000478938 FABP2P12104 132 aa17.47■□□□□ 0.39
SDF4-206ENST00000478938 OR9G9P0C7N8 305 aa17.47■□□□□ 0.39
SDF4-206ENST00000478938 CCL2P13500 99 aa17.47■□□□□ 0.39
SDF4-206ENST00000478938 ARL4DP49703 201 aa17.47■□□□□ 0.39
SDF4-206ENST00000478938 CHCHD1Q96BP2 118 aaKnown RBP17.47■□□□□ 0.39
SDF4-206ENST00000478938 CRISPLD2Q9H0B8 497 aa17.47■□□□□ 0.39
SDF4-206ENST00000478938 ZNF257Q9Y2Q1 563 aa17.47■□□□□ 0.39
SDF4-206ENST00000478938 PRSS46E5RG02 174 aa17.46■□□□□ 0.39
SDF4-206ENST00000478938 AESQ08117 197 aa17.46■□□□□ 0.39
SDF4-206ENST00000478938 ABHD12Q8N2K0 398 aa17.46■□□□□ 0.39
SDF4-206ENST00000478938 HEYLQ9NQ87 328 aaPredicted RBP17.46■□□□□ 0.39
SDF4-206ENST00000478938 KCNIP1Q9NZI2 227 aa17.46■□□□□ 0.39
SDF4-206ENST00000478938 TMEM189A5PLL7 270 aa17.46■□□□□ 0.39
SDF4-206ENST00000478938 ANKRD30BLA7E2S9 258 aa17.46■□□□□ 0.39
SDF4-206ENST00000478938 GUSBP1Q15486 140 aa17.46■□□□□ 0.39
SDF4-206ENST00000478938 TCTEX1D4Q5JR98 221 aa17.46■□□□□ 0.39
SDF4-206ENST00000478938 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.46■□□□□ 0.39
SDF4-206ENST00000478938 LINC01545Q5VT33 79 aa17.46■□□□□ 0.39
SDF4-206ENST00000478938 LSM4Q9Y4Z0 139 aaKnown RBP17.46■□□□□ 0.39
SDF4-206ENST00000478938 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.45■□□□□ 0.38
SDF4-206ENST00000478938 LIPFP07098 398 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 CCL7P80098 99 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 NFAM1Q8NET5 270 aaPredicted RBP17.45■□□□□ 0.38
SDF4-206ENST00000478938 IDI2-AS1Q9NZ38 188 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 R4GN57 208 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 NCKAP5O14513 1909 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 NCR2O95944 276 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 YAF2Q8IY57 180 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 FAM216AQ8WUB2 273 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 ZNF503Q96F45 646 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 CDX2Q99626 313 aaPredicted RBP17.45■□□□□ 0.38
SDF4-206ENST00000478938 SH2D2AQ9NP31 389 aa17.45■□□□□ 0.38
SDF4-206ENST00000478938 FCGR2BP31994 310 aaPredicted RBP17.44■□□□□ 0.38
SDF4-206ENST00000478938 CATR1Q13166 79 aa17.44■□□□□ 0.38
SDF4-206ENST00000478938 FAM162BQ5T6X4 162 aa17.44■□□□□ 0.38
SDF4-206ENST00000478938 GRAMD2BQ96HH9 432 aa17.44■□□□□ 0.38
SDF4-206ENST00000478938 SPATA25Q9BR10 227 aa17.44■□□□□ 0.38
SDF4-206ENST00000478938 C1QTNF5Q9BXJ0 243 aa17.44■□□□□ 0.38
SDF4-206ENST00000478938 PLEKHA3Q9HB20 300 aa17.44■□□□□ 0.38
SDF4-206ENST00000478938 KLK10O43240 276 aa17.44■□□□□ 0.38
SDF4-206ENST00000478938 EIF4EBP1Q13541 118 aaPredicted RBP17.44■□□□□ 0.38
SDF4-206ENST00000478938 MRAP2Q96G30 205 aa17.44■□□□□ 0.38
SDF4-206ENST00000478938 C5orf49A4QMS7 147 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 WISP2O76076 250 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 TM4SF20Q53R12 229 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 SAMD5Q5TGI4 173 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 ZNF497Q6ZNH5 498 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms