RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 INS-IGF2F8WCM5 200 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 CCL24O00175 119 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 DUS4LO95620 317 aaKnown RBP20.72■□□□□ 0.91
CCM2-211ENST00000478582 PF4P02776 101 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 SULT1A3P0DMM9 295 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 SULT1A4P0DMN0 295 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 DEFA1P59665 94 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 DEFA3P59666 94 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 C4orf46Q504U0 113 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 C19orf35Q6ZS72 473 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 DUSP18Q8NEJ0 188 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 PDCD10Q9BUL8 212 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 CACFD1Q9UGQ2 172 aa20.72■□□□□ 0.91
CCM2-211ENST00000478582 IGLV11-55A0A075B6I3 123 aa20.71■□□□□ 0.91
CCM2-211ENST00000478582 TRAV6A0A075B6T7 132 aa20.71■□□□□ 0.91
CCM2-211ENST00000478582 IFNA17P01571 189 aa20.71■□□□□ 0.91
CCM2-211ENST00000478582 H2AFB2P0C5Z0 115 aa20.71■□□□□ 0.91
CCM2-211ENST00000478582 DEFA4P12838 97 aa20.71■□□□□ 0.91
CCM2-211ENST00000478582 OR2C3Q8N628 320 aa20.71■□□□□ 0.91
CCM2-211ENST00000478582 WFDC9Q8NEX5 89 aa20.71■□□□□ 0.91
CCM2-211ENST00000478582 OR5B12Q96R08 314 aa20.71■□□□□ 0.91
CCM2-211ENST00000478582 TMED3Q9Y3Q3 217 aa20.71■□□□□ 0.91
CCM2-211ENST00000478582 A0A1B0GU03 582 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 OR2J3O76001 311 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 IGHV3-11P01762 117 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 SPCS3P61009 180 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 ATP5G2Q06055 141 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 FHL3Q13643 280 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 SMCO1Q147U7 214 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 DEFB136Q30KP8 78 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 BEAN1Q3B7T3 259 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 OR11H1Q8NG94 326 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 COQ8AQ8NI60 647 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 ENKURQ8TC29 256 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 PLEKHA3Q9HB20 300 aa20.7■□□□□ 0.9
CCM2-211ENST00000478582 F11RQ9Y624 299 aaKnown RBP20.7■□□□□ 0.9
CCM2-211ENST00000478582 SLC25A6P12236 298 aa20.69■□□□□ 0.9
CCM2-211ENST00000478582 ZNF343Q6P1L6 599 aa20.69■□□□□ 0.9
CCM2-211ENST00000478582 LINC00482Q8N8I6 264 aa20.69■□□□□ 0.9
CCM2-211ENST00000478582 OR1L6Q8NGR2 347 aa20.69■□□□□ 0.9
CCM2-211ENST00000478582 OR1N2Q8NGR9 330 aa20.69■□□□□ 0.9
CCM2-211ENST00000478582 FBXL7Q9UJT9 491 aa20.69■□□□□ 0.9
CCM2-211ENST00000478582 DMRT1Q9Y5R6 373 aa20.69■□□□□ 0.9
CCM2-211ENST00000478582 CYB5BO43169 146 aa20.68■□□□□ 0.9
CCM2-211ENST00000478582 ERHP84090 104 aaKnown RBP20.68■□□□□ 0.9
CCM2-211ENST00000478582 DEFA5Q01523 94 aa20.68■□□□□ 0.9
CCM2-211ENST00000478582 KPRPQ5T749 579 aaPredicted RBP20.68■□□□□ 0.9
CCM2-211ENST00000478582 NRARPQ7Z6K4 114 aa20.68■□□□□ 0.9
CCM2-211ENST00000478582 ZNF114Q8NC26 417 aa20.68■□□□□ 0.9
CCM2-211ENST00000478582 MITD1Q8WV92 249 aa20.68■□□□□ 0.9
CCM2-211ENST00000478582 DUX3Q96PT4 197 aa20.68■□□□□ 0.9
CCM2-211ENST00000478582 NDUFB8O95169 186 aa20.67■□□□□ 0.9
CCM2-211ENST00000478582 HSPB1P04792 205 aaKnown RBP20.67■□□□□ 0.9
CCM2-211ENST00000478582 ZNF616Q08AN1 781 aa20.67■□□□□ 0.9
CCM2-211ENST00000478582 C15orf32Q32M92 178 aa20.67■□□□□ 0.9
CCM2-211ENST00000478582 OR1P1Q8NH06 330 aa20.67■□□□□ 0.9
CCM2-211ENST00000478582 THYN1Q9P016 225 aa20.67■□□□□ 0.9
CCM2-211ENST00000478582 PITX3O75364 302 aa20.66■□□□□ 0.9
CCM2-211ENST00000478582 MFAP2P55001 183 aa20.66■□□□□ 0.9
CCM2-211ENST00000478582 OXLD1Q5BKU9 147 aa20.66■□□□□ 0.9
CCM2-211ENST00000478582 SPINK9Q5DT21 86 aa20.66■□□□□ 0.9
CCM2-211ENST00000478582 OR52B4Q8NGK2 314 aa20.66■□□□□ 0.9
CCM2-211ENST00000478582 NOTCH3Q9UM47 2321 aa20.66■□□□□ 0.9
CCM2-211ENST00000478582 HOXB5P09067 269 aa20.65■□□□□ 0.9
CCM2-211ENST00000478582 CD33P20138 364 aa20.65■□□□□ 0.9
CCM2-211ENST00000478582 FAM209BQ5JX69 171 aa20.65■□□□□ 0.9
CCM2-211ENST00000478582 GGNBP1Q5YKI7 109 aa20.65■□□□□ 0.9
CCM2-211ENST00000478582 DPF1Q92782 380 aa20.65■□□□□ 0.9
CCM2-211ENST00000478582 RANGRFQ9HD47 186 aaPredicted RBP20.65■□□□□ 0.9
CCM2-211ENST00000478582 HSPB7Q9UBY9 170 aa20.65■□□□□ 0.9
CCM2-211ENST00000478582 LINC01619G3V211 115 aa20.64■□□□□ 0.89
CCM2-211ENST00000478582 IL5P05113 134 aa20.64■□□□□ 0.89
CCM2-211ENST00000478582 OR8U8P0C7N1 319 aa20.64■□□□□ 0.89
CCM2-211ENST00000478582 EXOSC2Q13868 293 aaKnown RBP20.64■□□□□ 0.89
CCM2-211ENST00000478582 SLC25A24Q6NUK1 477 aa20.64■□□□□ 0.89
CCM2-211ENST00000478582 ZNF431Q8TF32 576 aaPredicted RBP20.64■□□□□ 0.89
CCM2-211ENST00000478582 ENY2Q9NPA8 101 aa20.64■□□□□ 0.89
CCM2-211ENST00000478582 PEF1Q9UBV8 284 aaKnown RBP20.64■□□□□ 0.89
CCM2-211ENST00000478582 IGHV4OR15-8A0A075B7B6 117 aa20.63■□□□□ 0.89
CCM2-211ENST00000478582 A0A087WW49 117 aa20.63■□□□□ 0.89
CCM2-211ENST00000478582 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.63■□□□□ 0.89
CCM2-211ENST00000478582 HOXA1P49639 335 aaPredicted RBP20.63■□□□□ 0.89
CCM2-211ENST00000478582 TNFRSF9Q07011 255 aa20.63■□□□□ 0.89
CCM2-211ENST00000478582 PVRIGQ6DKI7 326 aa20.63■□□□□ 0.89
CCM2-211ENST00000478582 OR1S1Q8NH92 325 aa20.63■□□□□ 0.89
CCM2-211ENST00000478582 CXorf58Q96LI9 332 aa20.63■□□□□ 0.89
CCM2-211ENST00000478582 ADAP1O75689 374 aa20.62■□□□□ 0.89
CCM2-211ENST00000478582 SNCAP37840 140 aa20.62■□□□□ 0.89
CCM2-211ENST00000478582 PLET1Q6UQ28 207 aa20.62■□□□□ 0.89
CCM2-211ENST00000478582 VN1R17PQ8TDU5 208 aa20.62■□□□□ 0.89
CCM2-211ENST00000478582 SEC22CQ9BRL7 303 aa20.62■□□□□ 0.89
CCM2-211ENST00000478582 MARVELD1Q9BSK0 173 aa20.62■□□□□ 0.89
CCM2-211ENST00000478582 PALMDQ9NP74 551 aa20.62■□□□□ 0.89
CCM2-211ENST00000478582 ANKRD34BA5PLL1 514 aa20.61■□□□□ 0.89
CCM2-211ENST00000478582 FAM90A26D6RGX4 464 aa20.61■□□□□ 0.89
CCM2-211ENST00000478582 IFNA21P01568 189 aa20.61■□□□□ 0.89
CCM2-211ENST00000478582 BSXQ3C1V8 233 aa20.61■□□□□ 0.89
CCM2-211ENST00000478582 EEF1AKMT3Q96AZ1 226 aa20.61■□□□□ 0.89
CCM2-211ENST00000478582 TRBV7-1A0A0A6YYK4 115 aa20.6■□□□□ 0.89
CCM2-211ENST00000478582 CEBPZOSA8MTT3 80 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms