RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 RNF125Q96EQ8 232 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 PGLYRP3Q96LB9 341 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 DERL3Q96Q80 235 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 CMSS1Q9BQ75 279 aaKnown RBP5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 SRSF8Q9BRL6 282 aaKnown RBP5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 C1QTNF4Q9BXJ3 329 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 LPAR5Q9H1C0 372 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 Q9H3A6 140 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 KCNK15Q9H427 330 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 XCL2Q9UBD3 114 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 PRELID3BQ9Y3B1 194 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 RBM7Q9Y580 266 aaKnown RBP5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 M0QYG6 137 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 ST8SIA3O43173 380 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 SERPINE2P07093 398 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 CD37P11049 281 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 ETV1P50549 477 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 TAS2R43P59537 309 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 WT1-ASQ06250 92 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 EIF4EBP1Q13541 118 aaPredicted RBP5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 FLOT2Q14254 428 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 SSX1Q16384 188 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 Q56UQ5 140 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 C1orf100Q5SVJ3 147 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 SLC25A24Q6NUK1 477 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 Q6ZRN7 208 aaPredicted RBP5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 KCTD9Q7L273 389 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 H1FOOQ8IZA3 346 aaPredicted RBP5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 CBR4Q8N4T8 237 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 UBAC2Q8NBM4 344 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 OR10W1Q8NGF6 305 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 OR4S2Q8NH73 311 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 DCANP1Q8TF63 244 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 ARHGAP5-AS1Q96IT6 56 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 RAB40CQ96S21 281 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 FAM107BQ9H098 131 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 BET1LQ9NYM9 111 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 RABAC1Q9UI14 185 aa5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 MRPS7Q9Y2R9 242 aaKnown RBP5.09□□□□□ -1.59
SPTLC1-205ENST00000477888 TRAV3A0A0B4J244 114 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 IGHV3-66A0A0C4DH42 116 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 A0A1W2PPQ1 181 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 CYB5BO43169 146 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 HRASP01112 189 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 CDK1P06493 297 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 ZNF688P0C7X2 276 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 GNB3P16520 340 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 FGF9P31371 208 aaPredicted RBP5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 NUTF2P61970 127 aaKnown RBP5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 HAMPP81172 84 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 USF2Q15853 346 aaPredicted RBP5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 TTC32Q5I0X7 151 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 PLAC9Q5JTB6 97 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 ZNF773Q6PK81 442 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 GSG1LQ6UXU4 331 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 AMIGO2Q86SJ2 522 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 RHOXF1Q8NHV9 184 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 PECRQ9BY49 303 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 NXF2Q9GZY0 626 aaKnown RBP5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 FGF20Q9NP95 211 aaPredicted RBP5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 ZNF446Q9NWS9 450 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 KCNK7Q9Y2U2 307 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 RBMX2Q9Y388 322 aaKnown RBP5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 PUS1Q9Y606 427 aaKnown RBP eCLIP5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 RFNGQ9Y644 331 aa5.08□□□□□ -1.6
SPTLC1-205ENST00000477888 RPS10-NUDT3A0A1W2PQS6 291 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 H3BMM0 161 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 UPK2O00526 184 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 NUDT3O95989 172 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 IFNA5P01569 189 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 EIF4EP06730 217 aaKnown RBP5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 OR13C7P0DN81 318 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 DCKP27707 260 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 ALDH3B2P48448 385 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 TIMM50Q3ZCQ8 353 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 TTC23Q5W5X9 447 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 TOMM20LQ6UXN7 152 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 TMPRSS11AQ6ZMR5 421 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 SSX7Q7RTT5 188 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 LRRTM1Q86UE6 522 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 ZFP41Q8N8Y5 198 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 ZNF485Q8NCK3 441 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 DEFB104AQ8WTQ1 72 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 GINS4Q9BRT9 223 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 URM1Q9BTM9 101 aaKnown RBP5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 QTRT1Q9BXR0 403 aaKnown RBP5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 COMMD5Q9GZQ3 224 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 OAZ3Q9UMX2 235 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 POMPQ9Y244 141 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 ARL2BPQ9Y2Y0 163 aa5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 YTHDF2Q9Y5A9 579 aaKnown RBP5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 F11RQ9Y624 299 aaKnown RBP5.07□□□□□ -1.6
SPTLC1-205ENST00000477888 LRP2P98164 4655 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 IGKV1D-8A0A087WSZ0 117 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 SAC3D1A6NKF1 404 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 J3QRK9 145 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 SCGB1D1O95968 90 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 HLA-DQB1P01920 261 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 FCGR3AP08637 254 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 FGF2P09038 288 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms