RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 EIF5AL1Q6IS14 154 aaKnown RBP9.61□□□□□ -0.87
PRPF39-203ENST00000477626 Q8N9W7 124 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 SLC45A2Q9UMX9 530 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 FBXO7Q9Y3I1 522 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 SPTAN1Q13813 2472 aaKnown RBP9.6□□□□□ -0.87
PRPF39-203ENST00000477626 UBE2L5PA0A1B0GUS4 154 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 SLC25A17O43808 307 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 FOXH1O75593 365 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 FAM120AOSQ5T036 256 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 ZNF787Q6DD87 383 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 PPP1R27Q86WC6 154 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 CITED4Q96RK1 184 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 UQCC1Q9NVA1 299 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 MPDU1O75352 247 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 TOX4O94842 621 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 NPY1RP25929 384 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 BLOC1S1P78537 153 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 hCG_1809904A0A1W2PP81 198 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 A0A1W2PPE2 198 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 A0A1W2PR64 198 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 A0A1W2PRV1 198 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 I3L2K1 104 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 GPX4P36969 197 aaPredicted RBP9.6□□□□□ -0.87
PRPF39-203ENST00000477626 CD69Q07108 199 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 ICAM4Q14773 271 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 OR10P1Q8NGE3 313 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 OR10G4Q8NGN3 311 aa9.6□□□□□ -0.87
PRPF39-203ENST00000477626 BEX4Q9NWD9 120 aaPredicted RBP9.6□□□□□ -0.87
PRPF39-203ENST00000477626 CEBPZOSA8MTT3 80 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 KRBOX1C9JBD0 128 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 AREGP15514 252 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 CTRB1P17538 263 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 LOXL1Q08397 574 aaPredicted RBP9.59□□□□□ -0.87
PRPF39-203ENST00000477626 MLANAQ16655 118 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 CTRB2Q6GPI1 263 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 ATRAIDQ6UW56 229 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 MOSP00540 346 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 RAB2AP61019 212 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 RNASE11Q8TAA1 199 aaKnown RBP9.59□□□□□ -0.87
PRPF39-203ENST00000477626 RNASEH2CQ8TDP1 164 aaKnown RBP9.59□□□□□ -0.87
PRPF39-203ENST00000477626 ZNF503Q96F45 646 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.59□□□□□ -0.871e-8■■■■■ 27.5
PRPF39-203ENST00000477626 DOPEY2Q9Y3R5 2298 aa9.59□□□□□ -0.87
PRPF39-203ENST00000477626 H7C2Y5 167 aa9.59□□□□□ -0.88
PRPF39-203ENST00000477626 RBMXL2O75526 392 aaKnown RBP9.59□□□□□ -0.88
PRPF39-203ENST00000477626 SAA4P35542 130 aa9.59□□□□□ -0.88
PRPF39-203ENST00000477626 RPL29P47914 159 aaKnown RBP9.59□□□□□ -0.88
PRPF39-203ENST00000477626 ZNF506Q5JVG8 444 aa9.59□□□□□ -0.88
PRPF39-203ENST00000477626 OR8G2PQ6IF36 304 aa9.59□□□□□ -0.88
PRPF39-203ENST00000477626 NBR2O15453 112 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 IFNA17P01571 189 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 C19orf35Q6ZS72 473 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 TEX15Q9BXT5 2789 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 NPFFO15130 113 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 SNRNP70P08621 437 aaKnown RBP9.58□□□□□ -0.88
PRPF39-203ENST00000477626 RPS16P62249 146 aaKnown RBP9.58□□□□□ -0.88
PRPF39-203ENST00000477626 C9orf139Q6ZV77 190 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 TMEM144Q7Z5S9 345 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 TMEM116Q8NCL8 245 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 CACNG8Q8WXS5 425 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 YPEL4Q96NS1 127 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 PRDM13Q9H4Q3 707 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 KIAA1456Q9P272 454 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 PFDN2Q9UHV9 154 aa9.58□□□□□ -0.88
PRPF39-203ENST00000477626 SLC25A16P16260 332 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 LGALS4P56470 323 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 C5orf64Q2M2E5 130 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 MMD2Q8IY49 270 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 RPEQ96AT9 228 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 SEC11CQ9BY50 192 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 PLEKHA3Q9HB20 300 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 FAM96BQ9Y3D0 163 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 F11RQ9Y624 299 aaKnown RBP9.57□□□□□ -0.88
PRPF39-203ENST00000477626 IGHV7-81A0A0B4J1V7 117 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 IGHV1-69DA0A0B4J2H0 117 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 A0A1W2PN81 502 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 IGHV1-69P01742 117 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 CHRNA7P36544 502 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 KRTAP1-1Q07627 177 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 GCSAMLQ5JQS6 135 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 PRSS57Q6UWY2 283 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 OR1P1Q8NH06 330 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 SMDT1Q9H4I9 107 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 NPIPB5A8MRT5 1133 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 SOX15O60248 233 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 HOXA1P49639 335 aaPredicted RBP9.57□□□□□ -0.88
PRPF39-203ENST00000477626 ATP5J2P56134 94 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 VMA21Q3ZAQ7 101 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 TTC9CQ8N5M4 171 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 ZNF48Q96MX3 618 aaPredicted RBP9.57□□□□□ -0.88
PRPF39-203ENST00000477626 RARRES2Q99969 163 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 HRH4Q9H3N8 390 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 NUP50Q9UKX7 468 aa9.57□□□□□ -0.88
PRPF39-203ENST00000477626 SOX21Q9Y651 276 aaPredicted RBP9.57□□□□□ -0.88
PRPF39-203ENST00000477626 LOC102723971A0A1B0GUV8 181 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 BTBD17A6NE02 478 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 HLA-DRB1P01911 266 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 MSMBP08118 114 aa9.56□□□□□ -0.88
PRPF39-203ENST00000477626 IGHV4-38-2P0DP08 117 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms