RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TMEM251Q8N6I4 163 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 OR5D13Q8NGL4 314 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 LINC00312Q9Y6C7 94 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 CFAP54Q96N23 3096 aa10.54□□□□□ -0.72
RTFDC1-207ENST00000477573 C3orf85A0A1B0GTC6 90 aa10.54□□□□□ -0.72
RTFDC1-207ENST00000477573 LRRC30A6NM36 301 aa10.54□□□□□ -0.72
RTFDC1-207ENST00000477573 LMX1BO60663 402 aa10.54□□□□□ -0.72
RTFDC1-207ENST00000477573 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
RTFDC1-207ENST00000477573 ZNF695Q8IW36 515 aa10.54□□□□□ -0.72
RTFDC1-207ENST00000477573 A0A1W2PNU3 283 aaPredicted RBP10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 hDV102S1A0JD36 115 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 PCNX2A6NKB5 2137 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 ANGPTL7O43827 346 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 ZIC3O60481 467 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 GAGE7O76087 117 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 AMY1AP04745 511 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 GAGE4Q13068 117 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 KLF5Q13887 457 aaPredicted RBP10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 RNPS1Q15287 305 aaKnown RBP10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 TNXAQ16473 311 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 PHLDA2Q53GA4 152 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 TRAT1Q6PIZ9 186 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 SLC25A47Q6Q0C1 308 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 FAM57BQ71RH2 274 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 ADAT3Q96EY9 351 aaPredicted RBP10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 EMC6Q9BV81 110 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 IGKV1D-8A0A087WSZ0 117 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 SYS1-DBNDD2H3BUS1 97 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 DNPH1O43598 174 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 CLDN17P56750 224 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 NMSQ5H8A3 153 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 ZNF114Q8NC26 417 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 TAF15Q92804 592 aaKnown RBP eCLIP10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 KIAA1549Q9HCM3 1950 aa10.53□□□□□ -0.72
RTFDC1-207ENST00000477573 H0Y980 276 aa10.52□□□□□ -0.72
RTFDC1-207ENST00000477573 FOXH1O75593 365 aa10.52□□□□□ -0.72
RTFDC1-207ENST00000477573 NDUFB4O95168 129 aa10.52□□□□□ -0.72
RTFDC1-207ENST00000477573 BLVRBP30043 206 aaPredicted RBP10.52□□□□□ -0.72
RTFDC1-207ENST00000477573 SLC35E4Q6ICL7 350 aa10.52□□□□□ -0.72
RTFDC1-207ENST00000477573 ZNF502Q8TBZ5 544 aa10.52□□□□□ -0.72
RTFDC1-207ENST00000477573 SSC4DQ8WTU2 575 aa10.52□□□□□ -0.72
RTFDC1-207ENST00000477573 LIME1Q9H400 295 aa10.52□□□□□ -0.72
RTFDC1-207ENST00000477573 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 RER1O15258 196 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 TGFAP01135 160 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 IGKV1D-33P01593 117 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 IGKV1-33P01594 117 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 KIR2DS4P43632 304 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 ATP5G2Q06055 141 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 RASL11AQ6T310 242 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 PIP4P1Q86T03 277 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 GATAD1Q8WUU5 269 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 TMEM133Q9H2Q1 129 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 SAP30LQ9HAJ7 183 aa10.52□□□□□ -0.73
RTFDC1-207ENST00000477573 PHF3Q92576 2039 aaKnown RBP10.51□□□□□ -0.73
RTFDC1-207ENST00000477573 ZNF850A8MQ14 1090 aa10.51□□□□□ -0.73
RTFDC1-207ENST00000477573 CFHR2P36980 270 aa10.51□□□□□ -0.73
RTFDC1-207ENST00000477573 UQCRFS1P47985 274 aa10.51□□□□□ -0.73
RTFDC1-207ENST00000477573 TMPRSS3P57727 454 aa10.51□□□□□ -0.73
RTFDC1-207ENST00000477573 Q6ZUT4 128 aa10.51□□□□□ -0.73
RTFDC1-207ENST00000477573 NRGNQ92686 78 aa10.51□□□□□ -0.73
RTFDC1-207ENST00000477573 CDIP1Q9H305 208 aa10.51□□□□□ -0.73
RTFDC1-207ENST00000477573 CRIM1Q9NZV1 1036 aa10.51□□□□□ -0.73
RTFDC1-207ENST00000477573 CENPVL3A0A0U1RRI6 287 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 LOC101059948A0A1B0GTJ6 334 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 NAPSAO96009 420 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 APCSP02743 223 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 OTPQ5XKR4 325 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 OR10G9Q8NGN4 311 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 ATP6V0E2Q8NHE4 81 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 TM2D2Q9BX73 214 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 SLC25A22Q9H936 323 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 B4GALT7Q9UBV7 327 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 CSDC2Q9Y534 153 aaKnown RBP10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 DOCK10Q96BY6 2186 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 ZNF318Q5VUA4 2279 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 CNTRLQ7Z7A1 2325 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 IGKV1D-43A0A0B4J1Z2 117 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 TMEM213A2RRL7 107 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 CT45A6P0DMU7 189 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 CT45A5P0DMU8 189 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 CT45A7P0DMV0 189 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 OR3A4PP47883 348 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 ALKBH6Q3KRA9 238 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 CT45A1Q5HYN5 189 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 ZFAND6Q6FIF0 208 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 Q6ZS49 121 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 OR4X2Q8NGF9 303 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 OR9G4Q8NGQ1 327 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 CT45A3Q8NHU0 189 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 OCC1Q8TAD7 63 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 OR2W1Q9Y3N9 320 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 SELENOKQ9Y6D0 94 aa10.5□□□□□ -0.73
RTFDC1-207ENST00000477573 TRBV20OR9-2A0A075B6H5 130 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 C9JCJ5 164 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 COX5AP20674 150 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms