RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 NYNRINQ9P2P1 1898 aaKnown RBP1.12□□□□□ -2.23
VPS50-213ENST00000477572 GRIN2BQ13224 1484 aa1.12□□□□□ -2.23
VPS50-213ENST00000477572 ABCC10Q5T3U5 1492 aa1.12□□□□□ -2.23
VPS50-213ENST00000477572 DNMT1P26358 1616 aaKnown RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 HECW1Q76N89 1606 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 A0A1W2PP64 1363 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 KDM5AP29375 1690 aaKnown RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 FLG2Q5D862 2391 aaPredicted RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 A0A096LPI6 279 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 ARL5CA6NH57 179 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 EEF1E1-BLOC1S5C9J1V9 151 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 K7ERU9 68 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 DEGS1O15121 323 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 TPST1O60507 370 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 PIAS1O75925 651 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 TNFSF15O95150 251 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 SOX14O95416 240 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 C8GP07360 202 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 UBBP0CG47 229 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 MPC1LP0DKB6 136 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 SULT1A3P0DMM9 295 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 SULT1A4P0DMN0 295 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 RPL7P18124 248 aaKnown RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 MYL12AP19105 171 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 RPS3P23396 243 aaKnown RBP eCLIP1.11□□□□□ -2.23
VPS50-213ENST00000477572 KDELR1P24390 212 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 CASP1P29466 404 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 RPA3P35244 121 aaPredicted RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 HSPA9P38646 679 aaKnown RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 DEFA1P59665 94 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 RPS20P60866 119 aaKnown RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 RAB5BP61020 215 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 PKIAP61925 76 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 GNG5P63218 68 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 EMX1Q04741 257 aaPredicted RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 BAXQ07812 192 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 PLCXD2Q0VAA5 305 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 LTC4SQ16873 150 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 ACOT6Q3I5F7 207 aaPredicted RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 OCIAD2Q56VL3 154 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 C10orf91Q5T1B1 145 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 NCMAPQ5T1S8 102 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 C1orf194Q5T5A4 169 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 TEX36Q5VZQ5 186 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 LAMTOR1Q6IAA8 161 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 TNFAIP8L2Q6P589 184 aaPredicted RBP1.11□□□□□ -2.23
VPS50-213ENST00000477572 TOMM20LQ6UXN7 152 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 NAA40Q86UY6 237 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 C9orf62Q8N4C0 152 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 FAM24BQ8N5W8 94 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 TSTD1Q8NFU3 115 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 OR52L1Q8NGH7 329 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 OR51A2Q8NGJ7 313 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 OR13C4Q8NGS5 318 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 ZNRF2Q8NHG8 242 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 FNDC9Q8TBE3 224 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 GPR119Q8TDV5 335 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 CAPZA3Q96KX2 299 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 PPP3R2Q96LZ3 170 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 BIRC8Q96P09 236 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 SUCNR1Q9BXA5 334 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 EBPLQ9BY08 206 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 MROQ9BYG7 248 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 LPAR5Q9H1C0 372 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 CISHQ9NSE2 258 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 PRNDQ9UKY0 176 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 PYCARDQ9ULZ3 195 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 TNFSF18Q9UNG2 199 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 POMPQ9Y244 141 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 HDGFL3Q9Y3E1 203 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 U3KQ87 197 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 TNS3Q68CZ2 1445 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 MIA2Q96PC5 1412 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 ANKRD26Q9UPS8 1709 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 FANCMQ8IYD8 2048 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 CECR2Q9BXF3 1484 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 MYH7BA7E2Y1 1941 aa1.11□□□□□ -2.23
VPS50-213ENST00000477572 LRRIQ1Q96JM4 1722 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 REREQ9P2R6 1566 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 YTHDC2Q9H6S0 1430 aaKnown RBP1.1□□□□□ -2.23
VPS50-213ENST00000477572 KIAA1107Q9UPP5 1409 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 TRAV36DV7A0A075B6V5 113 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 IGHV2-26A0A0B4J1V2 119 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 LOC100130705A0A1B0GUX0 176 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 LOC102725191A0A1B0GVB3 256 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 SPAARA0A1B0GVQ0 90 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 A0A1B0GW64 132 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 C20orf202A1L168 122 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 TMEM189A5PLL7 270 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 C8orf87E5RJ46 101 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 H3BSA7 217 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 M0R143 59 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 MRASO14807 208 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 CCL25O15444 150 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 GGCTO75223 188 aaKnown RBP1.1□□□□□ -2.23
VPS50-213ENST00000477572 IFNA17P01571 189 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 TTRP02766 147 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 CSN2P05814 226 aa1.1□□□□□ -2.23
VPS50-213ENST00000477572 IL3P08700 152 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 199.5 ms