RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 OR10A3P58181 314 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 PAFAH1B2P68402 229 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 FABP5Q01469 135 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 RELQ04864 619 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-213ENST00000476777 TRAM1Q15629 374 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 CDNFQ49AH0 187 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 Q56UQ5 140 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 HACD4Q5VWC8 232 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 THOC7Q6I9Y2 204 aaKnown RBP8.19□□□□□ -1.1
BRCA1-213ENST00000476777 TCF24Q7RTU0 167 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 HSD17B13Q7Z5P4 300 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-213ENST00000476777 CENPSQ8N2Z9 138 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 LILRB2Q8N423 598 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 FAM24BQ8N5W8 94 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 PACRGLQ8N7B6 248 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 DGCR14Q96DF8 476 aaKnown RBP8.19□□□□□ -1.1
BRCA1-213ENST00000476777 NDUFAF3Q9BU61 184 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 CCL28Q9NRJ3 127 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 TMEM140Q9NV12 185 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 CELA1Q9UNI1 258 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 SRRM2Q9UQ35 2752 aaKnown RBP8.18□□□□□ -1.1
BRCA1-213ENST00000476777 IGLV2-18A0A075B6J9 118 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 TEX50A0A1B0GTY4 177 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 IFITM5A6NNB3 132 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 SULT1C2O00338 296 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 YIF1AO95070 293 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 HPRT1P00492 218 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 HSMCR30P0CW71 290 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 PSMA1P25786 263 aaKnown RBP8.18□□□□□ -1.1
BRCA1-213ENST00000476777 ARL6IP1Q15041 203 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 MSMO1Q15800 293 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 TMEM41BQ5BJD5 291 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 ZNF767PQ75MW2 155 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 STHQ8IWL8 128 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 NUDCD2Q8WVJ2 157 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 GIMAP1Q8WWP7 306 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 MS4A6AQ9H2W1 248 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 C8orf4Q9NR00 106 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 NDUFA4L2Q9NRX3 87 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 ANXA10Q9UJ72 324 aa8.18□□□□□ -1.1
BRCA1-213ENST00000476777 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 DNASE2O00115 360 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-213ENST00000476777 CD74P04233 296 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 CD5P06127 495 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 C4BPBP20851 252 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 TRPT1Q86TN4 253 aaKnown RBP8.17□□□□□ -1.1
BRCA1-213ENST00000476777 MAPKAPK5-AS1Q8N8E1 139 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 CSNK1G2-AS1Q8NCQ2 148 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 DMBX1Q8NFW5 382 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 OR1L8Q8NGR8 309 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 SECTM1Q8WVN6 248 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 ST8SIA2Q92186 375 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 LSM10Q969L4 123 aaKnown RBP8.17□□□□□ -1.1
BRCA1-213ENST00000476777 ATG5Q9H1Y0 275 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 VSIRQ9H7M9 311 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 NACAE9PAV3 2078 aa8.17□□□□□ -1.1
BRCA1-213ENST00000476777 TRAV2A0A0B4J234 112 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 TMEM235A6NFC5 223 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 SSX5O60225 188 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 APOHP02749 345 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-213ENST00000476777 SPP1P10451 314 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 FCGR2CP31995 323 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 SOHLH1Q5JUK2 328 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 MORN3Q6PF18 240 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-213ENST00000476777 Q6ZRM9 215 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 ZBTB34Q8NCN2 500 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 OR13F1Q8NGS4 319 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 HINT2Q9BX68 163 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 NXF2Q9GZY0 626 aaKnown RBP8.16□□□□□ -1.1
BRCA1-213ENST00000476777 PLEKHA2Q9HB19 425 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 ACOT13Q9NPJ3 140 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 CLEC5AQ9NY25 188 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 TBC1D24Q9ULP9 559 aa8.16□□□□□ -1.1
BRCA1-213ENST00000476777 TRAV1-2A0A0B4J238 106 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 I3L2K1 104 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 PDCD5O14737 125 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 ST8SIA3O43173 380 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 IFNA10P01566 189 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 PTHLHP12272 177 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 MLLT11Q13015 90 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-213ENST00000476777 CATR1Q13166 79 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 DUSP18Q8NEJ0 188 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 OR1P1Q8NH06 330 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 OR51H1Q8NH63 302 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 COMMD9Q9P000 198 aa8.15□□□□□ -1.1
BRCA1-213ENST00000476777 IGHV3-66A0A0C4DH42 116 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 MARCH11A6NNE9 402 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 KNCNA6PVL3 124 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 C16orf90A8MZG2 172 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 PPYP01298 95 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 IFNA21P01568 189 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 IFNA17P01571 189 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 EIF4EP06730 217 aaKnown RBP8.14□□□□□ -1.11
BRCA1-213ENST00000476777 MFAP4P55083 255 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 RPL11P62913 178 aaKnown RBP8.14□□□□□ -1.11
BRCA1-213ENST00000476777 C1orf134Q5TEV5 83 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 TOMM20LQ6UXN7 152 aa8.14□□□□□ -1.11
BRCA1-213ENST00000476777 ZNF818PQ6ZRF7 136 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms