RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TPRKBQ9Y3C4 175 aa8.69□□□□□ -1.02
HDAC6-219ENST00000476625 F11RQ9Y624 299 aaKnown RBP8.69□□□□□ -1.02
HDAC6-219ENST00000476625 IGHV4-4A0A075B6R2 117 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 ELOA3CA0A087WX78 387 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-219ENST00000476625 K7EMT4 169 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 YIF1AO95070 293 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 HPRT1P00492 218 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 CLEC2LP0C7M8 214 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 NQO2P16083 231 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 HLA-DMBP28068 263 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 G6PCP35575 357 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 ARPC4P59998 168 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 AADACL3Q5VUY0 350 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 TCF24Q7RTU0 167 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 ZNF575Q86XF7 245 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 BEST4Q8NFU0 473 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 SLC25A38Q96DW6 304 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 DCSTAMPQ9H295 470 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 VCX3BQ9H321 246 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 NDUFA4L2Q9NRX3 87 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 NDUFB11Q9NX14 153 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 CLEC5AQ9NY25 188 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 THYN1Q9P016 225 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 DAPK2Q9UIK4 370 aa8.68□□□□□ -1.02
HDAC6-219ENST00000476625 TRDV1A0A1B0GX56 115 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 PRSS29PA6NIE9 313 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 C15orf62A8K5M9 175 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 RLN1P04808 185 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 TMEM187Q14656 261 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 SPSB3Q6PJ21 355 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 PRSS48Q7RTY5 328 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 SLC25A46Q96AG3 418 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 MISP3Q96FF7 219 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 RNF167Q9H6Y7 350 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 OR51B2Q9Y5P1 312 aa8.67□□□□□ -1.02
HDAC6-219ENST00000476625 TRAV18A0A075B6X5 111 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 KNCNA6PVL3 124 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 RBFOX2O43251 390 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC6-219ENST00000476625 DFFBO76075 338 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 KRASP01116 189 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 LPAR6P43657 344 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 SPINK9Q5DT21 86 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 ZNF367Q7RTV3 350 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 OR1L8Q8NGR8 309 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 FCAMRQ8WWV6 532 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 LSM10Q969L4 123 aaKnown RBP8.66□□□□□ -1.02
HDAC6-219ENST00000476625 C6orf62Q9GZU0 229 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-219ENST00000476625 MS4A6AQ9H2W1 248 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 RRP15Q9Y3B9 282 aaKnown RBP8.66□□□□□ -1.02
HDAC6-219ENST00000476625 X6R8D5 127 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 MUC4Q99102 2169 aa8.66□□□□□ -1.02
HDAC6-219ENST00000476625 MARCH11A6NNE9 402 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 I3L2K1 104 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 MED14OSP0DP75 135 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 GNRHRP30968 328 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 MXD1Q05195 221 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 CATR1Q13166 79 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 TBCEQ15813 527 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-219ENST00000476625 HOGA1Q86XE5 327 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 PINX1Q96BK5 328 aaKnown RBP8.65□□□□□ -1.02
HDAC6-219ENST00000476625 OR10C1Q96KK4 312 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 SRSF8Q9BRL6 282 aaKnown RBP8.65□□□□□ -1.02
HDAC6-219ENST00000476625 CENPOQ9BU64 300 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 PLEKHA2Q9HB19 425 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 TXNL4BQ9NX01 149 aaKnown RBP8.65□□□□□ -1.02
HDAC6-219ENST00000476625 RHBDL2Q9NX52 303 aa8.65□□□□□ -1.02
HDAC6-219ENST00000476625 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 TRAV14DV4A0A0A6YYC5 116 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 C15orf61A6NNL5 157 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 NOTOA8MTQ0 251 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 ST8SIA3O43173 380 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 MT-CO2P00403 227 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 ARL6IP1Q15041 203 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 IZUMO4Q1ZYL8 232 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 SFXN4Q6P4A7 337 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 TOMM20LQ6UXN7 152 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 LINC00336Q6ZUF6 198 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 NXF2Q9GZY0 626 aaKnown RBP8.64□□□□□ -1.03
HDAC6-219ENST00000476625 FXYD6Q9H0Q3 95 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 ZFAND3Q9H8U3 227 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 COMMD9Q9P000 198 aa8.64□□□□□ -1.03
HDAC6-219ENST00000476625 A0A1B0GU03 582 aa8.63□□□□□ -1.03
HDAC6-219ENST00000476625 MRPS14O60783 128 aaKnown RBP8.63□□□□□ -1.03
HDAC6-219ENST00000476625 PGLYRP1O75594 196 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-219ENST00000476625 RPL11P62913 178 aaKnown RBP8.63□□□□□ -1.03
HDAC6-219ENST00000476625 MSMO1Q15800 293 aa8.63□□□□□ -1.03
HDAC6-219ENST00000476625 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
HDAC6-219ENST00000476625 TRPT1Q86TN4 253 aaKnown RBP8.63□□□□□ -1.03
HDAC6-219ENST00000476625 ZBTB34Q8NCN2 500 aa8.63□□□□□ -1.03
HDAC6-219ENST00000476625 DGCR14Q96DF8 476 aaKnown RBP8.63□□□□□ -1.03
HDAC6-219ENST00000476625 CNBD2Q96M20 576 aa8.63□□□□□ -1.03
HDAC6-219ENST00000476625 MRPL36Q9P0J6 103 aaKnown RBP8.63□□□□□ -1.03
HDAC6-219ENST00000476625 RABAC1Q9UI14 185 aa8.63□□□□□ -1.03
HDAC6-219ENST00000476625 HSPG2P98160 4391 aa8.63□□□□□ -1.03
HDAC6-219ENST00000476625 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 C11orf94C9JXX5 98 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 DNASE2O00115 360 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-219ENST00000476625 CYB5BO43169 146 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 IGKV1-39P01597 117 aa8.62□□□□□ -1.03
HDAC6-219ENST00000476625 PMP2P02689 132 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms