RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 MUC7Q8TAX7 377 aa12.31□□□□□ -0.44
COL1A1-205ENST00000476387 SIGLEC8Q9NYZ4 499 aa12.31□□□□□ -0.44
COL1A1-205ENST00000476387 F11RQ9Y624 299 aaKnown RBP12.31□□□□□ -0.44
COL1A1-205ENST00000476387 HUWE1Q7Z6Z7 4374 aaKnown RBP12.31□□□□□ -0.44
COL1A1-205ENST00000476387 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 DBX1A6NMT0 343 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 OR2C1O95371 312 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 GPR183P32249 361 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 SGPP2Q8IWX5 399 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 Q8N402 240 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 OR1L6Q8NGR2 347 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 VN1R17PQ8TDU5 208 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 DYNLRB2Q8TF09 96 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 C19orf73Q9NVV2 129 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 DMRT1Q9Y5R6 373 aa12.3□□□□□ -0.44
COL1A1-205ENST00000476387 TEX13DA0A0J9YY54 714 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-205ENST00000476387 ZNF701M0R085 212 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-205ENST00000476387 PRCDQ00LT1 54 aa12.29□□□□□ -0.44
COL1A1-205ENST00000476387 FAM106AQ4KMX7 169 aa12.29□□□□□ -0.44
COL1A1-205ENST00000476387 GPHB5Q86YW7 130 aa12.29□□□□□ -0.44
COL1A1-205ENST00000476387 OR51S1Q8NGJ8 323 aa12.29□□□□□ -0.44
COL1A1-205ENST00000476387 ZNF502Q8TBZ5 544 aa12.29□□□□□ -0.44
COL1A1-205ENST00000476387 TM2D3Q9BRN9 247 aa12.29□□□□□ -0.44
COL1A1-205ENST00000476387 RBM38Q9H0Z9 239 aaKnown RBP12.29□□□□□ -0.44
COL1A1-205ENST00000476387 PLEKHA3Q9HB20 300 aa12.29□□□□□ -0.44
COL1A1-205ENST00000476387 MCUBQ9NWR8 336 aa12.29□□□□□ -0.44
COL1A1-205ENST00000476387 SCP2D1Q9UJQ7 156 aa12.29□□□□□ -0.44
COL1A1-205ENST00000476387 LGALS9O00182 355 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 IGKV1-5P01602 117 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 CLEC3BP05452 202 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 UCP1P25874 307 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 FAUP35544 74 aaKnown RBP12.28□□□□□ -0.44
COL1A1-205ENST00000476387 HSPE1P61604 102 aaKnown RBP12.28□□□□□ -0.44
COL1A1-205ENST00000476387 SP6Q3SY56 376 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 PYDC2Q56P42 97 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 PLET1Q6UQ28 207 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 OR2K2Q8NGT1 345 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 RRNAD1Q96FB5 475 aaKnown RBP12.28□□□□□ -0.44
COL1A1-205ENST00000476387 SOSTQ9BQB4 213 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 PDCD10Q9BUL8 212 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 NAA60Q9H7X0 242 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 ZC4H2Q9NQZ6 224 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 SLC2A8Q9NY64 477 aa12.28□□□□□ -0.44
COL1A1-205ENST00000476387 ZNF320A2RRD8 509 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 C2orf70A6NJV1 201 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 OR5AC1P0C628 307 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 AP3S2P59780 193 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 IZUMO4Q1ZYL8 232 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 CASC10Q5T4H9 136 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 GTSCR1Q86UQ5 136 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 SLC35G3Q8N808 338 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 OR1P1Q8NH06 330 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 SCGB3A2Q96PL1 93 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 CITED4Q96RK1 184 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 THAP7Q9BT49 309 aaPredicted RBP12.27□□□□□ -0.45
COL1A1-205ENST00000476387 TMEM222Q9H0R3 208 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 C5orf66Q9H5L9 145 aa12.27□□□□□ -0.45
COL1A1-205ENST00000476387 IGHV3-21A0A0B4J1V1 117 aa12.26□□□□□ -0.45
COL1A1-205ENST00000476387 OR2T8A6NH00 312 aa12.26□□□□□ -0.45
COL1A1-205ENST00000476387 IFNA17P01571 189 aa12.26□□□□□ -0.45
COL1A1-205ENST00000476387 FOLR2P14207 255 aa12.26□□□□□ -0.45
COL1A1-205ENST00000476387 MFAP2P55001 183 aa12.26□□□□□ -0.45
COL1A1-205ENST00000476387 ERHP84090 104 aaKnown RBP12.26□□□□□ -0.45
COL1A1-205ENST00000476387 OR2C3Q8N628 320 aa12.26□□□□□ -0.45
COL1A1-205ENST00000476387 BSCL2Q96G97 398 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-205ENST00000476387 RTBDNQ9BSG5 229 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-205ENST00000476387 PALMDQ9NP74 551 aa12.26□□□□□ -0.45
COL1A1-205ENST00000476387 C21orf62Q9NYP8 219 aa12.26□□□□□ -0.45
COL1A1-205ENST00000476387 GPR132Q9UNW8 380 aa12.26□□□□□ -0.45
COL1A1-205ENST00000476387 CRYM-AS1A6NIL9 109 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 A8MWP6 167 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 TGOLN2O43493 480 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 P0C879 139 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 DHODHQ02127 395 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 Q56UQ5 140 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 SPINK9Q5DT21 86 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 SPANXN2Q5MJ10 180 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 SPSB3Q6PJ21 355 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 FAM219AQ8IW50 185 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 TOMM5Q8N4H5 51 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 UBAC2Q8NBM4 344 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 ZNF114Q8NC26 417 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 RBPMSQ93062 196 aaKnown RBP12.25□□□□□ -0.45
COL1A1-205ENST00000476387 MISP3Q96FF7 219 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 ATP6V0BQ99437 205 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 TECRQ9NZ01 308 aaKnown RBP12.25□□□□□ -0.45
COL1A1-205ENST00000476387 V9GYH0 126 aa12.25□□□□□ -0.45
COL1A1-205ENST00000476387 A0A0B4J293 547 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 IGHV3-35A0A0C4DH35 117 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 IZUMO1RA6ND01 250 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 K7EIM0 57 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 ST8SIA3O43173 380 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 CDS2O95674 445 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 LYL1P12980 280 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 SNCAP37840 140 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 HOXA1P49639 335 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-205ENST00000476387 CD300EQ496F6 205 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-205ENST00000476387 ADAMTSL5Q6ZMM2 481 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 SCARB1Q8WTV0 552 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 TRIM63Q969Q1 353 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms