RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 UFC1Q9Y3C8 167 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 OR51B2Q9Y5P1 312 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 F11RQ9Y624 299 aaKnown RBP5.2□□□□□ -1.58
HDAC3-207ENST00000475549 A0A0J9YWU9 116 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 K7EMT4 169 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 GPR31O00270 319 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 NDUFA4O00483 81 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 ZNF207O43670 478 aaKnown RBP5.19□□□□□ -1.58
HDAC3-207ENST00000475549 IGHV3-48P01763 117 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 ELK1P19419 428 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 PRSS3P35030 304 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 HERV-K104P61576 105 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 NCS1P62166 190 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 ZNF124Q15973 351 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 IZUMO4Q1ZYL8 232 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 ANKRD55Q3KP44 614 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 PHLDA2Q53GA4 152 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 HSD17B13Q7Z5P4 300 aaPredicted RBP5.19□□□□□ -1.58
HDAC3-207ENST00000475549 WFDC3Q8IUB2 231 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 LILRB2Q8N423 598 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 TSPAN14Q8NG11 270 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 OR5H2Q8NGV7 314 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 OR6F1Q8NGZ6 308 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 OR1P1Q8NH06 330 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 LSM10Q969L4 123 aaKnown RBP5.19□□□□□ -1.58
HDAC3-207ENST00000475549 BSCL2Q96G97 398 aaPredicted RBP5.19□□□□□ -1.58
HDAC3-207ENST00000475549 OR10C1Q96KK4 312 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 RNF2Q99496 336 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 SPAG8Q99932 426 aaPredicted RBP5.19□□□□□ -1.58
HDAC3-207ENST00000475549 C20orf24Q9BUV8 137 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 HINT2Q9BX68 163 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 DAZ1Q9NQZ3 744 aaKnown RBP5.19□□□□□ -1.58
HDAC3-207ENST00000475549 SMPXQ9UHP9 88 aa5.19□□□□□ -1.58
HDAC3-207ENST00000475549 IGHV3-49A0A0A0MS15 119 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 A0A0B4J293 547 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 C15orf61A6NNL5 157 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 C15orf62A8K5M9 175 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 CHEK1O14757 476 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 SPRY2O43597 315 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 APOHP02749 345 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-207ENST00000475549 CTSDP07339 412 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-207ENST00000475549 P0C879 139 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 TAS2R46P59540 309 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 ERVK-16P61578 105 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 VBP1P61758 197 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 TNFRSF9Q07011 255 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 DEFB135Q30KP9 77 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 FAM90A2PQ658T7 463 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 THOC7Q6I9Y2 204 aaKnown RBP5.18□□□□□ -1.58
HDAC3-207ENST00000475549 SPSB3Q6PJ21 355 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 Q6ZWC4 215 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 LYG2Q86SG7 212 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 TBC1D26Q86UD7 250 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 APRG1Q8IVJ8 170 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 CMTM1Q8IZ96 169 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 UBAC2Q8NBM4 344 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 OR5B3Q8NH48 314 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 RNF183Q96D59 192 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 ATP6V0BQ99437 205 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 FUNDC2Q9BWH2 189 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 MAP6D1Q9H9H5 199 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 COMMD3Q9UBI1 195 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 PRNDQ9UKY0 176 aa5.18□□□□□ -1.58
HDAC3-207ENST00000475549 IGHV3OR16-13A0A075B7E8 117 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 IGHV3-74A0A0B4J1X5 117 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 IGHV7-4-1A0A0J9YVY3 117 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 M0QYG6 137 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 HPGDSO60760 199 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 SNAPC5O75971 98 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 JTBO76095 146 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 MT-CO2P00403 227 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 IGKV1-5P01602 117 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 APOA1P02647 267 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 RPL35AP18077 110 aaKnown RBP5.17□□□□□ -1.58
HDAC3-207ENST00000475549 PI3P19957 117 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 FCGR2BP31994 310 aaPredicted RBP5.17□□□□□ -1.58
HDAC3-207ENST00000475549 UCP3P55916 312 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 Q56UQ5 140 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 SPINK9Q5DT21 86 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 PVRIGQ6DKI7 326 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 SNX29P2Q8IUI4 249 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 SLC38A6Q8IZM9 456 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 ZNF114Q8NC26 417 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 TMEM116Q8NCL8 245 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 OR4D10Q8NGI6 311 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 LINC00476Q8WZB0 136 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 BORCS5Q969J3 196 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 MRGPRFQ96AM1 343 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 RHPN1-AS1Q9BWJ2 59 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 NXF2Q9GZY0 626 aaKnown RBP5.17□□□□□ -1.58
HDAC3-207ENST00000475549 NAA50Q9GZZ1 169 aaKnown RBP5.17□□□□□ -1.58
HDAC3-207ENST00000475549 FAM212BQ9NTI7 297 aaPredicted RBP5.17□□□□□ -1.58
HDAC3-207ENST00000475549 FKBP11Q9NYL4 201 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 TP53TG1Q9Y2A0 90 aa5.17□□□□□ -1.58
HDAC3-207ENST00000475549 A0A087WXM4 84 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 KIR2DL5BA0A0G2JN68 375 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 KIR2DL5BA0A0G2JPC4 375 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 A6NHS1 94 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 UBE2CO00762 179 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 BMI1P35226 326 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms