RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 NAV3Q8IVL0 2385 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 LINC00862A6NCI5 91 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 FCN1O00602 326 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 FGF16O43320 207 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 CNIH1O95406 144 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 FBP1P09467 338 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 OR13C7P0DN81 318 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 SSBP2P81877 361 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-210ENST00000475329 WT1-ASQ06250 92 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 TUSC1Q2TAM9 212 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 SLC7A5P1Q8MH63 180 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 WFDC11Q8NEX6 87 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 OR2G3Q8NGZ4 309 aa10.94□□□□□ -0.66
TRAF4-210ENST00000475329 TAF15Q92804 592 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAF4-210ENST00000475329 PSMG3Q9BT73 122 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-210ENST00000475329 SMCO3A2RU48 225 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 TEX22C9J3V5 150 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 FNDC10F2Z333 226 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 ATP6V1G1O75348 118 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 FAM157CP0CG43 387 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 FGF7P21781 194 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 RAB5CP51148 216 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 TMEM182Q6ZP80 229 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-210ENST00000475329 ZNF114Q8NC26 417 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 ABHD5Q8WTS1 349 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 TIMM9Q9Y5J7 89 aa10.93□□□□□ -0.66
TRAF4-210ENST00000475329 ZNF705EA8MWA4 302 aaPredicted RBP10.92□□□□□ -0.66
TRAF4-210ENST00000475329 UMAD1C9J7I0 102 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 TRIM77I1YAP6 450 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 FXYD3Q14802 87 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 Q8N9W7 124 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 RNASEH2CQ8TDP1 164 aaKnown RBP10.92□□□□□ -0.66
TRAF4-210ENST00000475329 SSMEM1Q8WWF3 244 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 ARPC1AQ92747 370 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 SAT2Q96F10 170 aaPredicted RBP10.92□□□□□ -0.66
TRAF4-210ENST00000475329 CXorf58Q96LI9 332 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 P2RX4Q99571 388 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 SSX3Q99909 188 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 RASL11BQ9BPW5 248 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 RSG1Q9BU20 258 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 PLA2G2EQ9NZK7 142 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 WDR83OSQ9Y284 106 aa10.92□□□□□ -0.66
TRAF4-210ENST00000475329 MPDU1O75352 247 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 FSHBP01225 129 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 HLA-DRB1P01911 266 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 PRH1P02810 166 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 REG1AP05451 166 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 AREGP15514 252 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 MDKP21741 143 aaPredicted RBP10.91□□□□□ -0.66
TRAF4-210ENST00000475329 BLOC1S1P78537 153 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 AANATQ16613 207 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 AKR1C8PQ5T2L2 129 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 BTNL8Q6UX41 500 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 ZNF562Q6V9R5 426 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 COMMD7Q86VX2 200 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 LURAP1LQ8IV03 231 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 ZNF709Q8N972 641 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 NANPQ8TBE9 248 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 SLC25A33Q9BSK2 321 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 MED9Q9NWA0 146 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 PFDN2Q9UHV9 154 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
TRAF4-210ENST00000475329 C17orf112F2Z3M2 114 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 APELAP0DMC3 54 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 GPX4P36969 197 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-210ENST00000475329 CAMLGP49069 296 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 CX3CL1P78423 397 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 AKR1C1Q04828 323 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 CD69Q07108 199 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 ARSJQ5FYB0 599 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-210ENST00000475329 Q6ZRG5 221 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 CENPVQ7Z7K6 275 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-210ENST00000475329 OR1P1Q8NH06 330 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 CACNG8Q8WXS5 425 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 RBM14Q96PK6 669 aaKnown RBP10.9□□□□□ -0.66
TRAF4-210ENST00000475329 NPCDR1Q9BY65 106 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 NPVFQ9HCQ7 196 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 FBXO7Q9Y3I1 522 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 F11RQ9Y624 299 aaKnown RBP10.9□□□□□ -0.66
TRAF4-210ENST00000475329 RFNGQ9Y644 331 aa10.9□□□□□ -0.66
TRAF4-210ENST00000475329 SOX21Q9Y651 276 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-210ENST00000475329 NOTCH2Q04721 2471 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 CORTO00230 105 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 SMAD7O15105 426 aaKnown RBP10.89□□□□□ -0.67
TRAF4-210ENST00000475329 TSPAN9O75954 239 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 SERF2P84101 59 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 PVRIGQ6DKI7 326 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 TREML4Q6UXN2 200 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 DPPA3Q6W0C5 159 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 TMEM219Q86XT9 240 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 CIARTQ8N365 385 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-210ENST00000475329 TEX29Q8N6K0 151 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 C5orf56Q8N8D9 126 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 PIFOQ8TCI5 191 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 SLC35E1Q96K37 410 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 PARP11Q9NR21 331 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 KCNIP2Q9NS61 270 aa10.89□□□□□ -0.67
TRAF4-210ENST00000475329 PDZD2O15018 2839 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 IGHV7-81A0A0B4J1V7 117 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms