RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 VSIRQ9H7M9 311 aa5.53□□□□□ -1.52
USP54-211ENST00000474929 SDHAF2Q9NX18 166 aa5.53□□□□□ -1.52
USP54-211ENST00000474929 OR1A1Q9P1Q5 309 aa5.53□□□□□ -1.52
USP54-211ENST00000474929 CKLFQ9UBR5 152 aa5.53□□□□□ -1.52
USP54-211ENST00000474929 PSORS1C1Q9UIG5 152 aa5.53□□□□□ -1.52
USP54-211ENST00000474929 DIMT1Q9UNQ2 313 aaKnown RBP5.53□□□□□ -1.52
USP54-211ENST00000474929 PRELID3BQ9Y3B1 194 aa5.53□□□□□ -1.52
USP54-211ENST00000474929 IGHV3OR16-12A0A075B7B8 117 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 IGHV3OR16-8A0A075B7F1 116 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 TRBV6-6A0A0A6YYG2 114 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 NPIPB6E9PJ23 425 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 K7EP13 123 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 K7EQG2 157 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 OGG1O15527 345 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 CRTAPO75718 401 aaPredicted RBP5.52□□□□□ -1.53
USP54-211ENST00000474929 NAPSAO96009 420 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 ZNF688P0C7X2 276 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 Q56UQ5 140 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 AWAT2Q6E213 333 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 CADM3Q8N126 398 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 STXBP6Q8NFX7 210 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 OR4C16Q8NGL9 310 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 GPR148Q8TDV2 347 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 ZNF184Q99676 751 aaPredicted RBP5.52□□□□□ -1.53
USP54-211ENST00000474929 AIFM2Q9BRQ8 373 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 DCUN1D5Q9BTE7 237 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 PLCXD1Q9NUJ7 323 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 RDH8Q9NYR8 311 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 NDUFA13Q9P0J0 144 aa5.52□□□□□ -1.53
USP54-211ENST00000474929 A6NHS1 94 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 MYL12BO14950 172 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 DIRAS3O95661 229 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 CELP19835 753 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 SNRPD3P62318 126 aaKnown RBP5.51□□□□□ -1.53
USP54-211ENST00000474929 RPL8P62917 257 aaKnown RBP5.51□□□□□ -1.53
USP54-211ENST00000474929 ASAH1Q13510 395 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 CCDC58Q4VC31 144 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 LCE2CQ5TA81 110 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 OR10K2Q6IF99 312 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 GLIPR1L1Q6UWM5 242 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 IZUMO2Q6UXV1 221 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 Q6ZSA8 131 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 FAM24BQ8N5W8 94 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 NANOGP1Q8N7R0 232 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 GDPD1Q8N9F7 314 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 UBAC2Q8NBM4 344 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 NARS2Q96I59 477 aaKnown RBP5.51□□□□□ -1.53
USP54-211ENST00000474929 C7orf50Q9BRJ6 194 aaKnown RBP5.51□□□□□ -1.53
USP54-211ENST00000474929 SEPSECSQ9HD40 501 aaKnown RBP5.51□□□□□ -1.53
USP54-211ENST00000474929 SCN3BQ9NY72 215 aa5.51□□□□□ -1.53
USP54-211ENST00000474929 RBM7Q9Y580 266 aaKnown RBP5.51□□□□□ -1.53
USP54-211ENST00000474929 TRAV9-2A0A087WT02 112 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 IGHV3-49A0A0A0MS15 119 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 HELTA6NFD8 242 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 SIVA1O15304 175 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 CDK1P06493 297 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 FGF2P09038 288 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 SRMP19623 302 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 DUTP33316 252 aaKnown RBP5.5□□□□□ -1.53
USP54-211ENST00000474929 RBM48Q5RL73 367 aaKnown RBP5.5□□□□□ -1.53
USP54-211ENST00000474929 LELP1Q5T871 98 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 ZNF773Q6PK81 442 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 CDH26Q8IXH8 852 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 LILRB2Q8N423 598 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 ZNF485Q8NCK3 441 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 OR6M1Q8NGM8 313 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 OR4S2Q8NH73 311 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 ST8SIA2Q92186 375 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 SMIM19Q96E16 107 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 GNPNAT1Q96EK6 184 aaPredicted RBP5.5□□□□□ -1.53
USP54-211ENST00000474929 CNBD2Q96M20 576 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 RAB40CQ96S21 281 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 CENPOQ9BU64 300 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 CCDC90BQ9GZT6 254 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 C12orf4Q9NQ89 552 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 FKBP14Q9NWM8 211 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 TPRKBQ9Y3C4 175 aa5.5□□□□□ -1.53
USP54-211ENST00000474929 H3BNG1 76 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 HRASP01112 189 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 HSMCR30P0CW71 290 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 HLA-DRB4P13762 266 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 CD36P16671 472 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 HLA-GP17693 338 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 CRHBPP24387 322 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 HSPA13P48723 471 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 WNT4P56705 351 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 RPS11P62280 158 aaKnown RBP eCLIP5.49□□□□□ -1.53
USP54-211ENST00000474929 INSL4Q14641 139 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 PSMG4Q5JS54 123 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 KCTD9Q7L273 389 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 PUSL1Q8N0Z8 303 aaKnown RBP5.49□□□□□ -1.53
USP54-211ENST00000474929 JAGN1Q8N5M9 183 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 RXFP4Q8TDU9 374 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 TMEM203Q969S6 136 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 MUL1Q969V5 352 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 TXN2Q99757 166 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 BANF2Q9H503 90 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 HLA-DRB4X5D2U9 266 aa5.49□□□□□ -1.53
USP54-211ENST00000474929 TNXBP22105 4242 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 TRAV8-7A0A075B6U6 113 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms