RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 ZNF439Q8NDP4 499 aa11.52□□□□□ -0.56
RPGR-206ENST00000474584 OR5AU1Q8NGC0 362 aa11.52□□□□□ -0.56
RPGR-206ENST00000474584 FAM222BQ8WU58 562 aa11.52□□□□□ -0.56
RPGR-206ENST00000474584 C19orf24Q9BVV8 132 aa11.52□□□□□ -0.56
RPGR-206ENST00000474584 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.56
RPGR-206ENST00000474584 SAMD10Q9BYL1 202 aa11.52□□□□□ -0.56
RPGR-206ENST00000474584 RNF7Q9UBF6 113 aa11.52□□□□□ -0.56
RPGR-206ENST00000474584 MBD3L4A6NDZ8 208 aaPredicted RBP11.52□□□□□ -0.57
RPGR-206ENST00000474584 MBD3L3A6NE82 208 aaPredicted RBP11.52□□□□□ -0.57
RPGR-206ENST00000474584 MBD3L5A6NJ08 208 aaPredicted RBP11.52□□□□□ -0.57
RPGR-206ENST00000474584 MT-ND6P03923 174 aa11.52□□□□□ -0.57
RPGR-206ENST00000474584 LINC00310P59036 64 aa11.52□□□□□ -0.57
RPGR-206ENST00000474584 Q0VG73 95 aa11.52□□□□□ -0.57
RPGR-206ENST00000474584 TMEM30BQ3MIR4 351 aa11.52□□□□□ -0.57
RPGR-206ENST00000474584 MBD3L2Q8NHZ7 208 aaPredicted RBP11.52□□□□□ -0.57
RPGR-206ENST00000474584 HSPB9Q9BQS6 159 aa11.52□□□□□ -0.57
RPGR-206ENST00000474584 TNCP24821 2201 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 LOC400499M0QZD8 3231 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 UPK2O00526 184 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 STUMQ69YW2 141 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 FAM122AQ96E09 287 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 IGLV3-9A0A075B6K5 115 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 SELENOVP59797 346 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 TMEM183BQ1AE95 376 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 COX19Q49B96 90 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 DUX4L9Q6RFH8 374 aaPredicted RBP11.51□□□□□ -0.57
RPGR-206ENST00000474584 TEX43Q6ZNM6 134 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 DOLPP1Q86YN1 238 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 NEU1Q99519 415 aa11.51□□□□□ -0.57
RPGR-206ENST00000474584 TM4SF5O14894 197 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 OR5G3P0C626 314 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 RAB4AP20338 218 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 COL8A2P25067 703 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 CX3CL1P78423 397 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 C3orf36Q3SXR2 165 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 C2orf83Q53S99 150 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 TPTE2P1Q5T6R2 138 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 SEM1Q6ZVN7 128 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 PNKDQ8N490 385 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 OR5B3Q8NH48 314 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 GCM1Q9NP62 436 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 PARD6AQ9NPB6 346 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 OSTCQ9NRP0 149 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 NAT8BQ9UHF3 227 aa11.5□□□□□ -0.57
RPGR-206ENST00000474584 IGKV1OR2-108A0A075B7D4 117 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 CD33P20138 364 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 TNFAIP6P98066 277 aaPredicted RBP11.49□□□□□ -0.57
RPGR-206ENST00000474584 SLC25A48Q6ZT89 311 aaKnown RBP11.49□□□□□ -0.57
RPGR-206ENST00000474584 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 ST6GALNAC3Q8NDV1 305 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 OR1L8Q8NGR8 309 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 GAFA1Q96PS6 74 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 C20orf144Q9BQM9 153 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 RNASE7Q9H1E1 156 aaKnown RBP11.49□□□□□ -0.57
RPGR-206ENST00000474584 TEX50A0A1B0GTY4 177 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 GGTLC3B5MD39 225 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 CT45A6P0DMU7 189 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 CT45A5P0DMU8 189 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 CT45A7P0DMV0 189 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 FOSL1P15407 271 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 TNFSF4P23510 183 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 ZNF705AQ6ZN79 300 aaPredicted RBP11.49□□□□□ -0.57
RPGR-206ENST00000474584 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
RPGR-206ENST00000474584 SIGLECL1Q8N7X8 197 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 VAMP8Q9BV40 100 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 LINC00574Q9H8X3 128 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 BET1LQ9NYM9 111 aa11.49□□□□□ -0.57
RPGR-206ENST00000474584 RPUSD1Q9UJJ7 312 aaKnown RBP11.49□□□□□ -0.57
RPGR-206ENST00000474584 DYSFO75923 2080 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 A0A1W2PRE2 83 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 M0QZK8 103 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 ISLRO14498 428 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 GATA2P23769 480 aaPredicted RBP11.48□□□□□ -0.57
RPGR-206ENST00000474584 BRS3P32247 399 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 FAM216BQ8N7L0 139 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 CCL13Q99616 98 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 ATG101Q9BSB4 218 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 MRPL32Q9BYC8 188 aaKnown RBP11.48□□□□□ -0.57
RPGR-206ENST00000474584 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
RPGR-206ENST00000474584 C8orf88P0DMB2 117 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 IRF2P14316 349 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 CDKN1AP38936 164 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 TDGF1P3P51864 188 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 FXYD3Q14802 87 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
RPGR-206ENST00000474584 ZNF474Q6S9Z5 364 aaPredicted RBP11.48□□□□□ -0.57
RPGR-206ENST00000474584 VN1R17PQ8TDU5 208 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 GNB4Q9HAV0 340 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 ZNF586Q9NXT0 402 aa11.48□□□□□ -0.57
RPGR-206ENST00000474584 SRRM4A7MD48 611 aaKnown RBP11.47□□□□□ -0.57
RPGR-206ENST00000474584 F2Z2F3 143 aa11.47□□□□□ -0.57
RPGR-206ENST00000474584 SPINK4O60575 86 aa11.47□□□□□ -0.57
RPGR-206ENST00000474584 MMP23AO75900 390 aa11.47□□□□□ -0.57
RPGR-206ENST00000474584 IGHV1-46P01743 117 aa11.47□□□□□ -0.57
RPGR-206ENST00000474584 RNASE2P10153 161 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms