RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 LHFPL5Q8TAF8 219 aa14.38□□□□□ -0.11
CCDC171-206ENST00000474193 GPN1Q9HCN4 374 aaPredicted RBP14.38□□□□□ -0.11
CCDC171-206ENST00000474193 ZNF256Q9Y2P7 627 aaPredicted RBP14.38□□□□□ -0.11
CCDC171-206ENST00000474193 C15orf61A6NNL5 157 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 BRI3O95415 125 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 PTTG1O95997 202 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 DHFRP00374 187 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 OR2B8PP59922 312 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 ANKRD55Q3KP44 614 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 ASPHD1Q5U4P2 390 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 LRTM2Q8N967 370 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 OR5B3Q8NH48 314 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 HINT2Q9BX68 163 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 QTRT1Q9BXR0 403 aaKnown RBP14.37□□□□□ -0.11
CCDC171-206ENST00000474193 CACFD1Q9UGQ2 172 aa14.37□□□□□ -0.11
CCDC171-206ENST00000474193 INMT-MINDY4F8WBC2 141 aa14.36□□□□□ -0.11
CCDC171-206ENST00000474193 IFNA21P01568 189 aa14.36□□□□□ -0.11
CCDC171-206ENST00000474193 TRAPPC2P0DI81 140 aa14.36□□□□□ -0.11
CCDC171-206ENST00000474193 TRAPPC2BP0DI82 140 aa14.36□□□□□ -0.11
CCDC171-206ENST00000474193 MECP2P51608 486 aaKnown RBP14.36□□□□□ -0.11
CCDC171-206ENST00000474193 SSBP2P81877 361 aaPredicted RBP14.36□□□□□ -0.11
CCDC171-206ENST00000474193 C10orf55Q5SWW7 151 aa14.36□□□□□ -0.11
CCDC171-206ENST00000474193 THOC7Q6I9Y2 204 aaKnown RBP14.36□□□□□ -0.11
CCDC171-206ENST00000474193 LYZL2Q7Z4W2 148 aa14.36□□□□□ -0.11
CCDC171-206ENST00000474193 B9D2Q9BPU9 175 aa14.36□□□□□ -0.11
CCDC171-206ENST00000474193 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.36□□□□□ -0.11
CCDC171-206ENST00000474193 TMEM14BQ9NUH8 114 aa14.36□□□□□ -0.11
CCDC171-206ENST00000474193 TMED3Q9Y3Q3 217 aa14.36□□□□□ -0.11
CCDC171-206ENST00000474193 TEX50A0A1B0GTY4 177 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 PRAF2O60831 178 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 IFNA17P01571 189 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 APELAP0DMC3 54 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 SULT1A3P0DMM9 295 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 SULT1A4P0DMN0 295 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 IZUMO4Q1ZYL8 232 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 RGS21Q2M5E4 152 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 HSD17B13Q7Z5P4 300 aaPredicted RBP14.35□□□□□ -0.11
CCDC171-206ENST00000474193 ZNF431Q8TF32 576 aaPredicted RBP14.35□□□□□ -0.11
CCDC171-206ENST00000474193 GPR146Q96CH1 333 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 PRR25Q96S07 402 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 SRSF8Q9BRL6 282 aaKnown RBP14.35□□□□□ -0.11
CCDC171-206ENST00000474193 PEF1Q9UBV8 284 aaKnown RBP14.35□□□□□ -0.11
CCDC171-206ENST00000474193 ZNF257Q9Y2Q1 563 aa14.35□□□□□ -0.11
CCDC171-206ENST00000474193 A0A0B4J293 547 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 ANKRD34BA5PLL1 514 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 IL5P05113 134 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 HOXB5P09067 269 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 P0C879 139 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 HSPE1P61604 102 aaKnown RBP14.34□□□□□ -0.11
CCDC171-206ENST00000474193 ACSM6Q6P461 480 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 UXS1Q8NBZ7 420 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 OR52B4Q8NGK2 314 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 MITD1Q8WV92 249 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 MARVELD1Q9BSK0 173 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 ENY2Q9NPA8 101 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 CACNG5Q9UF02 275 aa14.34□□□□□ -0.11
CCDC171-206ENST00000474193 A0A0G2JRQ6 117 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 A0A1B0GU03 582 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 HMX3A6NHT5 357 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 FAM223BA6NKX1 122 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 MYOD1P15172 320 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 ATP5G2Q06055 141 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 SMCO1Q147U7 214 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 FAM209BQ5JX69 171 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 FAM223AQ8IWN6 122 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 C12orf45Q8N5I9 185 aaPredicted RBP14.33□□□□□ -0.12
CCDC171-206ENST00000474193 SEC22CQ9BRL7 303 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 NDUFA4L2Q9NRX3 87 aa14.33□□□□□ -0.12
CCDC171-206ENST00000474193 CYB5BO43169 146 aa14.32□□□□□ -0.12
CCDC171-206ENST00000474193 ST8SIA3O43173 380 aa14.32□□□□□ -0.12
CCDC171-206ENST00000474193 NHLRC4P0CG21 123 aaPredicted RBP14.32□□□□□ -0.12
CCDC171-206ENST00000474193 DEFA4P12838 97 aa14.32□□□□□ -0.12
CCDC171-206ENST00000474193 RPEL1Q2QD12 228 aa14.32□□□□□ -0.12
CCDC171-206ENST00000474193 NMSQ5H8A3 153 aa14.32□□□□□ -0.12
CCDC171-206ENST00000474193 TTC9CQ8N5M4 171 aa14.32□□□□□ -0.12
CCDC171-206ENST00000474193 OR1S1Q8NH92 325 aa14.32□□□□□ -0.12
CCDC171-206ENST00000474193 PLEKHA3Q9HB20 300 aa14.32□□□□□ -0.12
CCDC171-206ENST00000474193 TNCP24821 2201 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 SORL1Q92673 2214 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 TEX22C9J3V5 150 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 E7EUB6 86 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 SLC25A6P12236 298 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 SPCS3P61009 180 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 ERHP84090 104 aaKnown RBP14.31□□□□□ -0.12
CCDC171-206ENST00000474193 RHOGP84095 191 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 GGNBP1Q5YKI7 109 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 ZNF343Q6P1L6 599 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 Q6ZRM9 215 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 LSM4Q9Y4Z0 139 aaKnown RBP14.31□□□□□ -0.12
CCDC171-206ENST00000474193 SMAD5-AS1Q9Y6J3 95 aa14.31□□□□□ -0.12
CCDC171-206ENST00000474193 DBX1A6NMT0 343 aa14.3□□□□□ -0.12
CCDC171-206ENST00000474193 NPIPB5A8MRT5 1133 aa14.3□□□□□ -0.12
CCDC171-206ENST00000474193 SNRPGP15A8MWD9 76 aa14.3□□□□□ -0.12
CCDC171-206ENST00000474193 OR13C7P0DN81 318 aa14.3□□□□□ -0.12
CCDC171-206ENST00000474193 SPNP16150 400 aa14.3□□□□□ -0.12
CCDC171-206ENST00000474193 PSMB6P28072 239 aa14.3□□□□□ -0.12
CCDC171-206ENST00000474193 HOXA1P49639 335 aaPredicted RBP14.3□□□□□ -0.12
CCDC171-206ENST00000474193 PRCDQ00LT1 54 aa14.3□□□□□ -0.12
CCDC171-206ENST00000474193 NECAP1Q8NC96 275 aa14.3□□□□□ -0.12
CCDC171-206ENST00000474193 OR52E5Q8NH55 327 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms