RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 ADCY9O60503 1353 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 HLA-DRB1P01911 266 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 ZNF80P51504 273 aaPredicted RBP1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 HBA1P69905 142 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 STX5Q13190 355 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 ZNF345Q14585 488 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 IMPG1Q17R60 797 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 RPL22L1Q6P5R6 122 aaKnown RBP1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 AAED1Q7RTV5 226 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 C20orf196Q8IYI0 205 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 RASSF5Q8WWW0 418 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 TMEM106AQ96A25 262 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 YIPF3Q9GZM5 350 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 MED9Q9NWA0 146 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 CPAMD8Q8IZJ3 1885 aa1.48□□□□□ -2.17
PRPF40A-208ENST00000472760 TONSLQ96HA7 1378 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 PTPRSQ13332 1948 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 UBE2IP63279 158 aaKnown RBP1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 RUNX1Q01196 453 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 KISS1Q15726 138 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 KIAA2026Q5HYC2 2103 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 SPANXN3Q5MJ09 141 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 LPCAT3Q6P1A2 487 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 WFDC11Q8NEX6 87 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 RETNLBQ9BQ08 111 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 PARD6GQ9BYG4 376 aaPredicted RBP1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 PKIGQ9Y2B9 76 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 SETD5Q9C0A6 1442 aa1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 ZFHX2Q9C0A1 2572 aaPredicted RBP1.47□□□□□ -2.17
PRPF40A-208ENST00000472760 TTC21AQ8NDW8 1320 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 IGKV3-7A0A075B6H7 116 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 IGKV1-5P01602 117 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 IL9P15248 144 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 HIST1H1TP22492 207 aaPredicted RBP1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 SNRPD2P62316 118 aaKnown RBP1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 ANKRD29Q8N6D5 301 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 ZNF439Q8NDP4 499 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 OR13C4Q8NGS5 318 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 CCDC42Q96M95 316 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 PPP1R2P1Q96PQ5 205 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 SCGB3A1Q96QR1 104 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 GINS4Q9BRT9 223 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 FBXL12Q9NXK8 326 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 VPS29Q9UBQ0 182 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 GLI3P10071 1580 aa1.46□□□□□ -2.18
PRPF40A-208ENST00000472760 IGKV1D-43A0A0B4J1Z2 117 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 TMEM212A6NML5 194 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 CHP2O43745 196 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 RPL5P46777 297 aaKnown RBP1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 CEBPGP53567 150 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 ITGB3BPQ13352 177 aaPredicted RBP1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 SURF2Q15527 256 aaPredicted RBP1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 KCNJ8Q15842 424 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 ACOT6Q3I5F7 207 aaPredicted RBP1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 SPOPLQ6IQ16 392 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 BPIFA4PQ86YQ2 179 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 DCUN1D1Q96GG9 259 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 CKLFQ9UBR5 152 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 MALRD1Q5VYJ5 2156 aa1.45□□□□□ -2.18
PRPF40A-208ENST00000472760 FUOMA2VDF0 154 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 FAAHO00519 579 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 CLPSP04118 112 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 G6PCP35575 357 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 OMPP47874 163 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 LCN15Q6UWW0 184 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 TRAPPC5Q8IUR0 188 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 Q8N2B8 174 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 LINC00471Q8N535 108 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 SERPINI1Q99574 410 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 NIPSNAP1Q9BPW8 284 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 ULBP3Q9BZM4 244 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 C11orf68Q9H3H3 251 aaKnown RBP1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 TP73-AS1Q9UF72 201 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 PTPRBP23467 1997 aa1.44□□□□□ -2.18
PRPF40A-208ENST00000472760 WRNQ14191 1432 aaPredicted RBP eCLIP1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 DPRXA6NFQ7 191 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 CLDN24A6NM45 220 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 CRYZL1O95825 349 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 C10orf55Q5SWW7 151 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 CLVS1Q8IUQ0 354 aaPredicted RBP1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 CLDN22Q8N7P3 220 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 C15orf53Q8NAA6 179 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 OR8J2Q8NGG1 315 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 DNAJC9Q8WXX5 260 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 TOMM6Q96B49 74 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 TMEM56-RWDD3S4R434 201 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 MTUS2Q5JR59 1369 aa1.43□□□□□ -2.18
PRPF40A-208ENST00000472760 NUMA1Q14980 2115 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 RP1L1Q8IWN7 2480 aaPredicted RBP1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 TRAV9-1A0A075B6T8 112 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 TRAV14DV4A0A0A6YYC5 116 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 EXOC1LA0A1B0GW35 172 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 PQLC2LA1A4F0 135 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 OR5F1O95221 314 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 LYPLA2O95372 231 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 IFNA10P01566 189 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 SERPINA6P08185 405 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 RPS17P08708 135 aaKnown RBP1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 HTR1AP08908 422 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 RPS20P60866 119 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms