RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 MARC2Q969Z3 335 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 MRGPRFQ96AM1 343 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 BSCL2Q96G97 398 aaPredicted RBP6.77□□□□□ -1.33
USF1-204ENST00000472217 TMEM56Q96MV1 263 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 CHRDL1Q9BU40 450 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 ZNF436Q9C0F3 470 aaPredicted RBP6.77□□□□□ -1.33
USF1-204ENST00000472217 HIPK2Q9H2X6 1198 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 SRD5A3Q9H8P0 318 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 PALMDQ9NP74 551 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 FKBP11Q9NYL4 201 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 C21orf62Q9NYP8 219 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 EXTL2Q9UBQ6 330 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 UFC1Q9Y3C8 167 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 IFNA6P05013 189 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 PGAM2P15259 253 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 PI3P19957 117 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 ADMP35318 185 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 ELLP55199 621 aaPredicted RBP6.76□□□□□ -1.33
USF1-204ENST00000472217 RND3P61587 244 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 ZFAND6Q6FIF0 208 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 SPSB3Q6PJ21 355 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 H2BFWTQ7Z2G1 175 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 LHFPL1Q86WI0 220 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 ARRDC1Q8N5I2 433 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 UBAC2Q8NBM4 344 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 OR52B4Q8NGK2 314 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 OR1L6Q8NGR2 347 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 OR4A16Q8NH70 328 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 ABHD1Q96SE0 405 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 ATP6V0BQ99437 205 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 FAM110AQ9BQ89 295 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 MRPS26Q9BYN8 205 aaKnown RBP6.76□□□□□ -1.33
USF1-204ENST00000472217 MIXL1Q9H2W2 232 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 MRPL27Q9P0M9 148 aaKnown RBP6.76□□□□□ -1.33
USF1-204ENST00000472217 MTFP1Q9UDX5 166 aa6.76□□□□□ -1.33
USF1-204ENST00000472217 IGHV3OR16-8A0A075B7F1 116 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 TRAV25A0A0B4J276 109 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 NDUFA4O00483 81 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 TBPP20226 339 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 ALDH3B2P48448 385 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 PPP5CP53041 499 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 PRCDQ00LT1 54 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 SPCS2Q15005 226 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 IZUMO4Q1ZYL8 232 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 Q56UQ5 140 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 RBPMS2Q6ZRY4 209 aaKnown RBP6.75□□□□□ -1.33
USF1-204ENST00000472217 OR2C3Q8N628 320 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 OR4D10Q8NGI6 311 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 OR1P1Q8NH06 330 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 ZNF486Q96H40 463 aaPredicted RBP6.75□□□□□ -1.33
USF1-204ENST00000472217 ZNF414Q96IQ9 312 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 TP53RKQ96S44 253 aa6.75□□□□□ -1.33
USF1-204ENST00000472217 DAZ1Q9NQZ3 744 aaKnown RBP6.75□□□□□ -1.33
USF1-204ENST00000472217 HUWE1Q7Z6Z7 4374 aaKnown RBP6.74□□□□□ -1.33
USF1-204ENST00000472217 CTDSP2O14595 271 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 RGS5O15539 181 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 ZNF207O43670 478 aaKnown RBP6.74□□□□□ -1.33
USF1-204ENST00000472217 IGKV1-5P01602 117 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 CD74P04233 296 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 CTSGP08311 255 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 P0C879 139 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 AKR1C2P52895 323 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 PIGPP57054 158 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 HSPE1P61604 102 aaKnown RBP6.74□□□□□ -1.33
USF1-204ENST00000472217 ANKRD55Q3KP44 614 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 SPINK9Q5DT21 86 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 GPR141Q7Z602 305 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 TMEM229BQ8NBD8 167 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 ZNF114Q8NC26 417 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 OR13C8Q8NGS7 320 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 C15orf40Q8WUR7 153 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 MISP3Q96FF7 219 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 C20orf24Q9BUV8 137 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 C5orf66Q9H5L9 145 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 GAR1Q9NY12 217 aaKnown RBP6.74□□□□□ -1.33
USF1-204ENST00000472217 RYR3Q15413 4870 aa6.74□□□□□ -1.33
USF1-204ENST00000472217 A0A0B4J293 547 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 C3orf85A0A1B0GTC6 90 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 GABARAPH6UMI1 98 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 I3L2K1 104 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 K7EMT4 169 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 TSPAN4O14817 238 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 RAB3DO95716 219 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 MT-CO2P00403 227 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 IGHV3-48P01763 117 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 FCGR2BP31994 310 aaPredicted RBP6.73□□□□□ -1.33
USF1-204ENST00000472217 TAS2R19P59542 299 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 SP6Q3SY56 376 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 SCGB2B2Q4G0G5 96 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 FAAP20Q6NZ36 180 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 STEAP1BQ6NZ63 245 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 TERB2Q8NHR7 220 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 ZFAND1Q8TCF1 268 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 MARCH1Q8TCQ1 289 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 SPAG8Q99932 426 aaPredicted RBP6.73□□□□□ -1.33
USF1-204ENST00000472217 GGTLC1Q9BX51 225 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 COPZ2Q9P299 210 aa6.73□□□□□ -1.33
USF1-204ENST00000472217 LOC102724200A0A096LPH7 203 aaPredicted RBP6.72□□□□□ -1.33
USF1-204ENST00000472217 A0A0G2JRQ6 117 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 C15orf62A8K5M9 175 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms