RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 WDR61Q9GZS3 305 aaKnown RBP2.5□□□□□ -2.01
SCN3A-207ENST00000471697 RNASE7Q9H1E1 156 aaKnown RBP2.5□□□□□ -2.01
SCN3A-207ENST00000471697 ZNF702PQ9H963 129 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 TMEM242Q9NWH2 141 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 OR5V1Q9UGF6 321 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 PROCRQ9UNN8 238 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 WASHC3Q9Y3C0 194 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 MED31Q9Y3C7 131 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 FIS1Q9Y3D6 152 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 SLC25A15Q9Y619 301 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 SCN11AQ9UI33 1791 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 ITSN1Q15811 1721 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 CFTRP13569 1480 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 NUP210Q8TEM1 1887 aaPredicted RBP2.5□□□□□ -2.01
SCN3A-207ENST00000471697 MROH1Q8NDA8 1641 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 THSD7BQ9C0I4 1608 aa2.5□□□□□ -2.01
SCN3A-207ENST00000471697 COL1A2P08123 1366 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 SCN5AQ14524 2016 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 CCDC88CQ9P219 2028 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 CDC42BPBQ9Y5S2 1711 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 IGKV1-27A0A075B6S5 117 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 SMIM26A0A096LP01 95 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 TRAV8-3A0A0A6YYJ7 113 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 TRAV26-2A0A0B4J265 109 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 IGHV1-69DA0A0B4J2H0 117 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 IGHV3-16A0A0C4DH30 117 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 A0A1W2PP18 115 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 IGLC7A0M8Q6 106 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 C7orf77A4D0Y5 90 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 RPL37AP8A6NKH3 93 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 ZNF850A8MQ14 1090 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 FNDC10F2Z333 226 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 OVOL1O14753 267 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 NPFFO15130 113 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 LYRM1O43325 122 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 ANGPTL7O43827 346 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST1H2BKO60814 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 KRASP01116 189 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 IGHV3-48P01763 117 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 GYPAP02724 150 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST1H2BJP06899 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 IFITM1P13164 125 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST1H2BOP23527 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 GATA2P23769 480 aaPredicted RBP2.49□□□□□ -2.01
SCN3A-207ENST00000471697 LMO2P25791 158 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST1H2BBP33778 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 POLR2IP36954 125 aaKnown RBP2.49□□□□□ -2.01
SCN3A-207ENST00000471697 CA7P43166 264 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 NCBP2P52298 156 aaKnown RBP eCLIP2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST1H2BDP58876 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST1H2BCP62807 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 SEC11AP67812 179 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 MEF2CQ06413 473 aaPredicted RBP2.49□□□□□ -2.01
SCN3A-207ENST00000471697 PAX8Q06710 450 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 MMDQ15546 238 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 TWIST1Q15672 202 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 ADIRFQ15847 76 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 PRR4Q16378 134 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST2H2BEQ16778 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 C6orf99Q4VX62 202 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 CLLU1OSQ5K130 101 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.49□□□□□ -2.01
SCN3A-207ENST00000471697 IBA57Q5T440 356 aaKnown RBP2.49□□□□□ -2.01
SCN3A-207ENST00000471697 FAM222AQ5U5X8 452 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 ZNF660Q6AZW8 331 aaPredicted RBP2.49□□□□□ -2.01
SCN3A-207ENST00000471697 AMMECR1LQ6DCA0 310 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 ZNF880Q6PDB4 577 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 Q6ZRU5 148 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 TCF23Q7RTU1 214 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 C11orf53Q8IXP5 236 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 SLC25A45Q8N413 288 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 RFLNBQ8N5W9 214 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 ZIC4Q8N9L1 334 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 LINC00301Q8NCQ3 95 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 OR5D16Q8NGK9 328 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 ATP6V0E2Q8NHE4 81 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 RTN4IP1Q8WWV3 396 aaPredicted RBP2.49□□□□□ -2.01
SCN3A-207ENST00000471697 COPS9Q8WXC6 57 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 FRZBQ92765 325 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST1H2BHQ93079 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 RAB37Q96AX2 223 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 NEURL3Q96EH8 262 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 YPEL4Q96NS1 127 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 MCEEQ96PE7 176 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 AQP10Q96PS8 301 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST1H2BNQ99877 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 HIST1H2BMQ99879 126 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 SNRNP25Q9BV90 132 aaKnown RBP2.49□□□□□ -2.01
SCN3A-207ENST00000471697 TSSK6Q9BXA6 273 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 CLEC7AQ9BXN2 247 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 DUSP21Q9H596 190 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 EDA2RQ9HAV5 297 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 RPS10P5Q9NQ39 176 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 PARP11Q9NR21 331 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 RBM12B-AS1Q9P1G2 102 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 MDFICQ9P1T7 246 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 CACFD1Q9UGQ2 172 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 ZNF222Q9UK12 451 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 RALGAPBQ86X10 1494 aa2.49□□□□□ -2.01
SCN3A-207ENST00000471697 TANC1Q9C0D5 1861 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms