RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 RCVRNP35243 200 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 ZNF57Q68EA5 555 aaPredicted RBP11.51□□□□□ -0.57
COL1A1-203ENST00000471344 THOC7Q6I9Y2 204 aaKnown RBP11.51□□□□□ -0.57
COL1A1-203ENST00000471344 SLC25A24Q6NUK1 477 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 LPCAT3Q6P1A2 487 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 PLET1Q6UQ28 207 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 OR52I2Q8NH67 350 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 LSM10Q969L4 123 aaKnown RBP11.51□□□□□ -0.57
COL1A1-203ENST00000471344 ZNF414Q96IQ9 312 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 CHRDL1Q9BU40 450 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 NXF2Q9GZY0 626 aaKnown RBP11.51□□□□□ -0.57
COL1A1-203ENST00000471344 PALMDQ9NP74 551 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 F11RQ9Y624 299 aaKnown RBP11.51□□□□□ -0.57
COL1A1-203ENST00000471344 C15orf61A6NNL5 157 aa11.5□□□□□ -0.57
COL1A1-203ENST00000471344 K7EIM0 57 aa11.5□□□□□ -0.57
COL1A1-203ENST00000471344 PI3P19957 117 aa11.5□□□□□ -0.57
COL1A1-203ENST00000471344 IZUMO4Q1ZYL8 232 aa11.5□□□□□ -0.57
COL1A1-203ENST00000471344 HSD17B13Q7Z5P4 300 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-203ENST00000471344 MRGPRFQ96AM1 343 aa11.5□□□□□ -0.57
COL1A1-203ENST00000471344 SEC22AQ96IW7 307 aa11.5□□□□□ -0.57
COL1A1-203ENST00000471344 ZNF436Q9C0F3 470 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-203ENST00000471344 C6orf62Q9GZU0 229 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-203ENST00000471344 FAM212BQ9NTI7 297 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-203ENST00000471344 TMEM14BQ9NUH8 114 aa11.5□□□□□ -0.57
COL1A1-203ENST00000471344 KLK11Q9UBX7 282 aa11.5□□□□□ -0.57
COL1A1-203ENST00000471344 RSL24D1Q9UHA3 163 aaKnown RBP11.5□□□□□ -0.57
COL1A1-203ENST00000471344 SNAPC5O75971 98 aa11.49□□□□□ -0.57
COL1A1-203ENST00000471344 C8orf88P0DMB2 117 aa11.49□□□□□ -0.57
COL1A1-203ENST00000471344 MCFD2Q8NI22 146 aa11.49□□□□□ -0.57
COL1A1-203ENST00000471344 VN1R17PQ8TDU5 208 aa11.49□□□□□ -0.57
COL1A1-203ENST00000471344 SCARB1Q8WTV0 552 aa11.49□□□□□ -0.57
COL1A1-203ENST00000471344 TMEM190Q8WZ59 177 aa11.49□□□□□ -0.57
COL1A1-203ENST00000471344 THYN1Q9P016 225 aa11.49□□□□□ -0.57
COL1A1-203ENST00000471344 PRNDQ9UKY0 176 aa11.49□□□□□ -0.57
COL1A1-203ENST00000471344 HYDINQ4G0P3 5121 aa11.49□□□□□ -0.57
COL1A1-203ENST00000471344 PLECQ15149 4684 aaKnown RBP11.48□□□□□ -0.57
COL1A1-203ENST00000471344 CYB5BO43169 146 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
COL1A1-203ENST00000471344 CD3DP04234 171 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 S100GP29377 79 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 ADMP35318 185 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 UCP3P55916 312 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 SPINK9Q5DT21 86 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 SLC38A6Q8IZM9 456 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 UBAC2Q8NBM4 344 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 OR4D10Q8NGI6 311 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 OR52B4Q8NGK2 314 aa11.48□□□□□ -0.57
COL1A1-203ENST00000471344 ALMS1Q8TCU4 4167 aa11.47□□□□□ -0.57
COL1A1-203ENST00000471344 IGHV3-48P01763 117 aa11.47□□□□□ -0.57
COL1A1-203ENST00000471344 IFNA6P05013 189 aa11.47□□□□□ -0.57
COL1A1-203ENST00000471344 TNFSF8P32971 234 aa11.47□□□□□ -0.57
COL1A1-203ENST00000471344 SLC16A13Q7RTY0 426 aa11.47□□□□□ -0.57
COL1A1-203ENST00000471344 OR5B3Q8NH48 314 aa11.47□□□□□ -0.57
COL1A1-203ENST00000471344 BSCL2Q96G97 398 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-203ENST00000471344 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
COL1A1-203ENST00000471344 UFC1Q9Y3C8 167 aa11.47□□□□□ -0.57
COL1A1-203ENST00000471344 IGKV1-5P01602 117 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 PGAM2P15259 253 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 PPP5CP53041 499 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 H2BFWTQ7Z2G1 175 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 LHFPL1Q86WI0 220 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 DIRAS2Q96HU8 199 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 TP53RKQ96S44 253 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 TSC22D3Q99576 134 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 SOSTQ9BQB4 213 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 C20orf24Q9BUV8 137 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 FKBP11Q9NYL4 201 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 MRPL27Q9P0M9 148 aaKnown RBP11.46□□□□□ -0.57
COL1A1-203ENST00000471344 MTFP1Q9UDX5 166 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 UBQLN2Q9UHD9 624 aa11.46□□□□□ -0.57
COL1A1-203ENST00000471344 ELLP55199 621 aaPredicted RBP11.45□□□□□ -0.58
COL1A1-203ENST00000471344 Q56UQ5 140 aa11.45□□□□□ -0.58
COL1A1-203ENST00000471344 RNASE10Q5GAN6 216 aaKnown RBP11.45□□□□□ -0.58
COL1A1-203ENST00000471344 FAAP20Q6NZ36 180 aa11.45□□□□□ -0.58
COL1A1-203ENST00000471344 OR2C3Q8N628 320 aa11.45□□□□□ -0.58
COL1A1-203ENST00000471344 OR1L6Q8NGR2 347 aa11.45□□□□□ -0.58
COL1A1-203ENST00000471344 OR4A16Q8NH70 328 aa11.45□□□□□ -0.58
COL1A1-203ENST00000471344 C15orf40Q8WUR7 153 aa11.45□□□□□ -0.58
COL1A1-203ENST00000471344 MARC2Q969Z3 335 aa11.45□□□□□ -0.58
COL1A1-203ENST00000471344 MISP3Q96FF7 219 aa11.45□□□□□ -0.58
COL1A1-203ENST00000471344 TMEM56Q96MV1 263 aa11.45□□□□□ -0.58
COL1A1-203ENST00000471344 DAZ1Q9NQZ3 744 aaKnown RBP11.45□□□□□ -0.58
COL1A1-203ENST00000471344 LCE6AA0A183 80 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 I3L2K1 104 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 ZNF701M0R085 212 aaPredicted RBP11.44□□□□□ -0.58
COL1A1-203ENST00000471344 CTSGP08311 255 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 TBPP20226 339 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 PIGPP57054 158 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 RND3P61587 244 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 PRCDQ00LT1 54 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 IL18Q14116 193 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 RBPMS2Q6ZRY4 209 aaKnown RBP11.44□□□□□ -0.58
COL1A1-203ENST00000471344 OR1P1Q8NH06 330 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 SMIM4Q8WVI0 70 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 ATP6V0BQ99437 205 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 V9GYH0 126 aa11.44□□□□□ -0.58
COL1A1-203ENST00000471344 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 A0A0G2JRQ6 117 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 GABARAPH6UMI1 98 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 NDUFA4O00483 81 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms