RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 LINC00471Q8N535 108 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 LINC00469Q8N7U9 141 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 CYB561A3Q8NBI2 242 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 OR51D1Q8NGF3 324 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 OR4X2Q8NGF9 303 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 OR10G4Q8NGN3 311 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 RPS4Y2Q8TD47 263 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 IL22RA2Q969J5 263 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 AMELYQ99218 206 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 MICU1Q9BPX6 476 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF649Q9BS31 505 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 HDHD3Q9BSH5 251 aaPredicted RBP3.66□□□□□ -1.82
CKS1B-204ENST00000471245 SLC22A4Q9H015 551 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 OR52D1Q9H346 318 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 EDA2RQ9HAV5 297 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF331Q9NQX6 463 aaPredicted RBP3.66□□□□□ -1.82
CKS1B-204ENST00000471245 SAR1AQ9NR31 198 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 C19orf12Q9NSK7 152 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF391Q9UJN7 358 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF222Q9UK12 451 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 IGLV11-55A0A075B6I3 123 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 TRBV6-6A0A0A6YYG2 114 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 A0A0G2JND7 137 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 ANKRD20A5PA0PJZ0 165 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 GATCO43716 136 aaKnown RBP3.65□□□□□ -1.83
CKS1B-204ENST00000471245 SERPINA1P01009 418 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 IFNA14P01570 189 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 GYPBP06028 91 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 OR5H8P0DN80 308 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 PSG2P11465 335 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 IGFBP3P17936 291 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-204ENST00000471245 RAB3BP20337 219 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 RAB5AP20339 215 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 MYCNOSP40205 109 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 RPS10P46783 165 aaKnown RBP3.65□□□□□ -1.83
CKS1B-204ENST00000471245 DLX6P56179 175 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 CAV3P56539 151 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 TAS2R60P59551 318 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 POU2AF1Q16633 256 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 ZSCAN26Q16670 478 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 COQ5Q5HYK3 327 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 LINC01590Q5TEZ4 76 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 FAHD1Q6P587 224 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 DRAM2Q6UX65 266 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 SH2D6Q7Z4S9 175 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 DCXRQ7Z4W1 244 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 OR8D4Q8NGM9 314 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 OR9Q1Q8NGQ5 310 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 TMEM230Q96A57 120 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 C12orf43Q96C57 262 aaKnown RBP3.65□□□□□ -1.83
CKS1B-204ENST00000471245 ISOC1Q96CN7 298 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 RCN3Q96D15 328 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 GALNT14Q96FL9 552 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 ISYNA1Q9NPH2 558 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 ABCB10Q9NRK6 738 aa3.65□□□□□ -1.83
CKS1B-204ENST00000471245 NOP16Q9Y3C1 178 aaKnown RBP3.65□□□□□ -1.83
CKS1B-204ENST00000471245 DNAH6Q9C0G6 4158 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 DHRS12A0PJE2 317 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 OR2AT4A6NND4 320 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 ODF3BA8MYP8 253 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 ANKRD65E5RJM6 399 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 SNAI2O43623 268 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 CA11O75493 328 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 OR8U9P0C7N5 309 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 CCL3L1P16619 93 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 UBE2AP49459 152 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 RND2P52198 227 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 ZNF138P52744 262 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 HERVK_113P61574 105 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
CKS1B-204ENST00000471245 ZNF691Q5VV52 312 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 METTL21CQ5VZV1 264 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 DNM1P34Q6PK57 102 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 TCF23Q7RTU1 214 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 ARRDC1Q8N5I2 433 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 OR10Z1Q8NGY1 313 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 OR8S1Q8NH09 359 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 OR8U1Q8NH10 309 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 OR5K1Q8NHB7 308 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 APH1BQ8WW43 257 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 OR5P3Q8WZ94 311 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 LZICQ8WZA0 190 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 SPTSSAQ969W0 71 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 SLAMF6Q96DU3 332 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 MALSU1Q96EH3 234 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 REEP6Q96HR9 211 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 CYYR1Q96J86 154 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 ZNF488Q96MN9 340 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 COPS4Q9BT78 406 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 DNAH2Q9P225 4427 aa3.64□□□□□ -1.83
CKS1B-204ENST00000471245 IGHV3-74A0A0B4J1X5 117 aa3.63□□□□□ -1.83
CKS1B-204ENST00000471245 IGHV3-66A0A0C4DH42 116 aa3.63□□□□□ -1.83
CKS1B-204ENST00000471245 TMEM213A2RRL7 107 aa3.63□□□□□ -1.83
CKS1B-204ENST00000471245 ZNF850A8MQ14 1090 aa3.63□□□□□ -1.83
CKS1B-204ENST00000471245 BBIP1A8MTZ0 92 aa3.63□□□□□ -1.83
CKS1B-204ENST00000471245 ZNF593O00488 134 aaPredicted RBP3.63□□□□□ -1.83
CKS1B-204ENST00000471245 GCGP01275 180 aa3.63□□□□□ -1.83
CKS1B-204ENST00000471245 FABP3P05413 133 aa3.63□□□□□ -1.83
CKS1B-204ENST00000471245 ZNF823P16415 610 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms