RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 KBTBD11O94819 623 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 OR2A4O95047 310 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 GABARAPO95166 117 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 IGLV2-23P01705 113 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 FABP1P07148 127 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 OR9G9P0C7N8 305 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 DEFA4P12838 97 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 PGAM2P15259 253 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 HLA-DMAP28067 261 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 HRH1P35367 487 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 RPL27AP46776 148 aaKnown RBP4.42□□□□□ -1.7
VARS-222ENST00000470953 MECP2P51608 486 aaKnown RBP4.42□□□□□ -1.7
VARS-222ENST00000470953 RPL8P62917 257 aaKnown RBP4.42□□□□□ -1.7
VARS-222ENST00000470953 RHOGP84095 191 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 DEFA5Q01523 94 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 PJVKQ0ZLH3 352 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 EXOSC2Q13868 293 aaKnown RBP4.42□□□□□ -1.7
VARS-222ENST00000470953 RPEL1Q2QD12 228 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 TOR2AQ5JU69 321 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 C10orf55Q5SWW7 151 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 ACSM6Q6P461 480 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 SPAG16Q8N0X2 631 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 MFSD4AQ8N468 514 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 ZBTB34Q8NCN2 500 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 OR6Q1Q8NGQ2 317 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 OR6F1Q8NGZ6 308 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 RNASE11Q8TAA1 199 aaKnown RBP4.42□□□□□ -1.7
VARS-222ENST00000470953 MYOZ3Q8TDC0 251 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 CD300LFQ8TDQ1 290 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 C15orf40Q8WUR7 153 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 SNAPC3Q92966 411 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 RHOVQ96L33 236 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 OR2A7Q96R45 310 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 TCEAL7Q9BRU2 100 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 COMMD5Q9GZQ3 224 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 ZNF430Q9H8G1 570 aaPredicted RBP4.42□□□□□ -1.7
VARS-222ENST00000470953 RANGRFQ9HD47 186 aaPredicted RBP4.42□□□□□ -1.7
VARS-222ENST00000470953 CCL28Q9NRJ3 127 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 CCDC59Q9P031 241 aaKnown RBP4.42□□□□□ -1.7
VARS-222ENST00000470953 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 NUBP2Q9Y5Y2 271 aa4.42□□□□□ -1.7
VARS-222ENST00000470953 RAB19A4D1S5 217 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 FAM223BA6NKX1 122 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 CENPXA8MT69 81 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 GPR31O00270 319 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 RBMXL2O75526 392 aaKnown RBP4.41□□□□□ -1.7
VARS-222ENST00000470953 SNAPC5O75971 98 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 SCAF4O95104 1147 aaKnown RBP4.41□□□□□ -1.7
VARS-222ENST00000470953 PTTG1O95997 202 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 HSPB1P04792 205 aaKnown RBP4.41□□□□□ -1.7
VARS-222ENST00000470953 NQO2P16083 231 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 ZNF182P17025 639 aaPredicted RBP4.41□□□□□ -1.7
VARS-222ENST00000470953 HLA-GP17693 338 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 MAS1LP35410 378 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 RFX2P48378 723 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 RPL30P62888 115 aaKnown RBP4.41□□□□□ -1.7
VARS-222ENST00000470953 RUNX1Q01196 453 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 ATP5G2Q06055 141 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 MSMO1Q15800 293 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 TATDN3Q17R31 274 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 C21orf62-AS1Q17RA5 79 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 PHLDA2Q53GA4 152 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 RNASE10Q5GAN6 216 aaKnown RBP4.41□□□□□ -1.7
VARS-222ENST00000470953 Q5VSD8 79 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 LPCAT3Q6P1A2 487 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 ZNF818PQ6ZRF7 136 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 FAM223AQ8IWN6 122 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 OR4A5Q8NH83 315 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 DYNLRB2Q8TF09 96 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 RAB2BQ8WUD1 216 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 MOB3AQ96BX8 217 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 RNF183Q96D59 192 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 USMG5Q96IX5 58 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 GPHA2Q96T91 129 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 THAP7Q9BT49 309 aaPredicted RBP4.41□□□□□ -1.7
VARS-222ENST00000470953 HINT2Q9BX68 163 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 NAA50Q9GZZ1 169 aaKnown RBP4.41□□□□□ -1.7
VARS-222ENST00000470953 FXYD6Q9H0Q3 95 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 OR51M1Q9H341 326 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 TUBA4BQ9H853 241 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 TMEM140Q9NV12 185 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 SIGLEC8Q9NYZ4 499 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 COMMD9Q9P000 198 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 ZNF257Q9Y2Q1 563 aa4.41□□□□□ -1.7
VARS-222ENST00000470953 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.7
VARS-222ENST00000470953 A0A0J9YWU9 116 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 MARCH11A6NNE9 402 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 SRRM4A7MD48 611 aaKnown RBP4.4□□□□□ -1.71
VARS-222ENST00000470953 RBFOX2O43251 390 aaKnown RBP eCLIP4.4□□□□□ -1.71
VARS-222ENST00000470953 NDUFS6O75380 124 aaKnown RBP4.4□□□□□ -1.71
VARS-222ENST00000470953 OR2J3O76001 311 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 S1PR2O95136 353 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 SCGB1D2O95969 90 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 HPRT1P00492 218 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 PRH1P02810 166 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 REG1AP05451 166 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 CRYGBP07316 175 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 EGR2P11161 476 aaPredicted RBP4.4□□□□□ -1.71
VARS-222ENST00000470953 RPA2P15927 270 aa4.4□□□□□ -1.71
VARS-222ENST00000470953 ELK1P19419 428 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms