RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ZNF414Q96IQ9 312 aa12.19□□□□□ -0.46
COL9A3-208ENST00000469802 TSC22D3Q99576 134 aa12.19□□□□□ -0.46
COL9A3-208ENST00000469802 HINT2Q9BX68 163 aa12.19□□□□□ -0.46
COL9A3-208ENST00000469802 DAZ1Q9NQZ3 744 aaKnown RBP12.19□□□□□ -0.46
COL9A3-208ENST00000469802 FKBP11Q9NYL4 201 aa12.19□□□□□ -0.46
COL9A3-208ENST00000469802 OR2T8A6NH00 312 aa12.18□□□□□ -0.46
COL9A3-208ENST00000469802 TSPAN5P62079 268 aa12.18□□□□□ -0.46
COL9A3-208ENST00000469802 CTF1Q16619 201 aa12.18□□□□□ -0.46
COL9A3-208ENST00000469802 ANKRD55Q3KP44 614 aa12.18□□□□□ -0.46
COL9A3-208ENST00000469802 SLC25A24Q6NUK1 477 aa12.18□□□□□ -0.46
COL9A3-208ENST00000469802 TMEM56Q96MV1 263 aa12.18□□□□□ -0.46
COL9A3-208ENST00000469802 CHRDL1Q9BU40 450 aa12.18□□□□□ -0.46
COL9A3-208ENST00000469802 NAA50Q9GZZ1 169 aaKnown RBP12.18□□□□□ -0.46
COL9A3-208ENST00000469802 C5orf66Q9H5L9 145 aa12.18□□□□□ -0.46
COL9A3-208ENST00000469802 GAR1Q9NY12 217 aaKnown RBP12.18□□□□□ -0.46
COL9A3-208ENST00000469802 C21orf62Q9NYP8 219 aa12.18□□□□□ -0.46
COL9A3-208ENST00000469802 NDUFA4O00483 81 aa12.17□□□□□ -0.46
COL9A3-208ENST00000469802 S100GP29377 79 aa12.17□□□□□ -0.46
COL9A3-208ENST00000469802 RORCP51449 518 aa12.17□□□□□ -0.46
COL9A3-208ENST00000469802 LHFPL1Q86WI0 220 aa12.17□□□□□ -0.46
COL9A3-208ENST00000469802 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
COL9A3-208ENST00000469802 OR1L6Q8NGR2 347 aa12.17□□□□□ -0.46
COL9A3-208ENST00000469802 OR1P1Q8NH06 330 aa12.17□□□□□ -0.46
COL9A3-208ENST00000469802 IGHV3-21A0A0B4J1V1 117 aa12.16□□□□□ -0.46
COL9A3-208ENST00000469802 M0QYG6 137 aa12.16□□□□□ -0.46
COL9A3-208ENST00000469802 FCGR2BP31994 310 aaPredicted RBP12.16□□□□□ -0.46
COL9A3-208ENST00000469802 RND3P61587 244 aa12.16□□□□□ -0.46
COL9A3-208ENST00000469802 RBPMS2Q6ZRY4 209 aaKnown RBP12.16□□□□□ -0.46
COL9A3-208ENST00000469802 OR2C3Q8N628 320 aa12.16□□□□□ -0.46
COL9A3-208ENST00000469802 AP3S1Q92572 193 aa12.16□□□□□ -0.46
COL9A3-208ENST00000469802 MRGPRFQ96AM1 343 aa12.16□□□□□ -0.46
COL9A3-208ENST00000469802 SPAG8Q99932 426 aaPredicted RBP12.16□□□□□ -0.46
COL9A3-208ENST00000469802 GGTLC1Q9BX51 225 aa12.16□□□□□ -0.46
COL9A3-208ENST00000469802 TSPAN4O14817 238 aa12.15□□□□□ -0.46
COL9A3-208ENST00000469802 P0C879 139 aa12.15□□□□□ -0.46
COL9A3-208ENST00000469802 PRCDQ00LT1 54 aa12.15□□□□□ -0.46
COL9A3-208ENST00000469802 MZT2AQ6P582 158 aa12.15□□□□□ -0.46
COL9A3-208ENST00000469802 H2BFWTQ7Z2G1 175 aa12.15□□□□□ -0.46
COL9A3-208ENST00000469802 ZNF486Q96H40 463 aaPredicted RBP12.15□□□□□ -0.46
COL9A3-208ENST00000469802 KLK11Q9UBX7 282 aa12.15□□□□□ -0.46
COL9A3-208ENST00000469802 I3L2K1 104 aa12.14□□□□□ -0.47
COL9A3-208ENST00000469802 K7EMT4 169 aa12.14□□□□□ -0.47
COL9A3-208ENST00000469802 CTSGP08311 255 aa12.14□□□□□ -0.47
COL9A3-208ENST00000469802 ZNF182P17025 639 aaPredicted RBP12.14□□□□□ -0.47
COL9A3-208ENST00000469802 TBPP20226 339 aa12.14□□□□□ -0.47
COL9A3-208ENST00000469802 ARRDC1Q8N5I2 433 aa12.14□□□□□ -0.47
COL9A3-208ENST00000469802 OR52I2Q8NH67 350 aa12.14□□□□□ -0.47
COL9A3-208ENST00000469802 MTFP1Q9UDX5 166 aa12.14□□□□□ -0.47
COL9A3-208ENST00000469802 LOC102724200A0A096LPH7 203 aaPredicted RBP12.13□□□□□ -0.47
COL9A3-208ENST00000469802 C15orf62A8K5M9 175 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 FAM25AB3EWG3 89 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 FAM25CB3EWG5 89 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 FAM25GB3EWG6 89 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 HSPE1P61604 102 aaKnown RBP12.13□□□□□ -0.47
COL9A3-208ENST00000469802 ODF3L2Q3SX64 289 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 Q56UQ5 140 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 RNASE12Q5GAN4 147 aaKnown RBP12.13□□□□□ -0.47
COL9A3-208ENST00000469802 RNASE10Q5GAN6 216 aaKnown RBP12.13□□□□□ -0.47
COL9A3-208ENST00000469802 UBAC2Q8NBM4 344 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 OR4A16Q8NH70 328 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 IL17DQ8TAD2 202 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 ABHD1Q96SE0 405 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 OVOL2Q9BRP0 275 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 EXTL2Q9UBQ6 330 aa12.13□□□□□ -0.47
COL9A3-208ENST00000469802 IGHV3OR16-8A0A075B7F1 116 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 IGKV1-5P01602 117 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 CD74P04233 296 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 CD3DP04234 171 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 PI3P19957 117 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 PIGPP57054 158 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 OR10C1Q96KK4 312 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 TP53RKQ96S44 253 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 TXN2Q99757 166 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 C20orf24Q9BUV8 137 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 HYDINQ4G0P3 5121 aa12.12□□□□□ -0.47
COL9A3-208ENST00000469802 ALMS1Q8TCU4 4167 aa12.11□□□□□ -0.47
COL9A3-208ENST00000469802 INS-IGF2F8WCM5 200 aa12.11□□□□□ -0.47
COL9A3-208ENST00000469802 MT-CO2P00403 227 aa12.11□□□□□ -0.47
COL9A3-208ENST00000469802 RELQ04864 619 aaPredicted RBP12.11□□□□□ -0.47
COL9A3-208ENST00000469802 IZUMO4Q1ZYL8 232 aa12.11□□□□□ -0.47
COL9A3-208ENST00000469802 GPR107Q5VW38 600 aa12.11□□□□□ -0.47
COL9A3-208ENST00000469802 LAMTOR1Q6IAA8 161 aa12.11□□□□□ -0.47
COL9A3-208ENST00000469802 OR4D10Q8NGI6 311 aa12.11□□□□□ -0.47
COL9A3-208ENST00000469802 MISP3Q96FF7 219 aa12.11□□□□□ -0.47
COL9A3-208ENST00000469802 MIXL1Q9H2W2 232 aa12.11□□□□□ -0.47
COL9A3-208ENST00000469802 A0A0B4J293 547 aa12.1□□□□□ -0.47
COL9A3-208ENST00000469802 NUPL2O15504 423 aaKnown RBP12.1□□□□□ -0.47
COL9A3-208ENST00000469802 ZNF207O43670 478 aaKnown RBP12.1□□□□□ -0.47
COL9A3-208ENST00000469802 PGAM2P15259 253 aa12.1□□□□□ -0.47
COL9A3-208ENST00000469802 PPP5CP53041 499 aa12.1□□□□□ -0.47
COL9A3-208ENST00000469802 MFAP4P55083 255 aa12.1□□□□□ -0.47
COL9A3-208ENST00000469802 PVRIGQ6DKI7 326 aa12.1□□□□□ -0.47
COL9A3-208ENST00000469802 C15orf40Q8WUR7 153 aa12.1□□□□□ -0.47
COL9A3-208ENST00000469802 NXF2Q9GZY0 626 aaKnown RBP12.1□□□□□ -0.47
COL9A3-208ENST00000469802 UBQLN2Q9UHD9 624 aa12.1□□□□□ -0.47
COL9A3-208ENST00000469802 SMPXQ9UHP9 88 aa12.1□□□□□ -0.47
COL9A3-208ENST00000469802 PLECQ15149 4684 aaKnown RBP12.1□□□□□ -0.47
COL9A3-208ENST00000469802 IGHV7-4-1A0A0J9YVY3 117 aa12.09□□□□□ -0.47
COL9A3-208ENST00000469802 OR4C46A6NHA9 309 aa12.09□□□□□ -0.47
COL9A3-208ENST00000469802 CTSDP07339 412 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms