RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 PDCD5O14737 125 aa13.19□□□□□ -0.3
TTC28-205ENST00000469670 NUPL2O15504 423 aaKnown RBP13.19□□□□□ -0.3
TTC28-205ENST00000469670 DFFBO76075 338 aa13.19□□□□□ -0.3
TTC28-205ENST00000469670 GIG44P09565 113 aaPredicted RBP13.19□□□□□ -0.3
TTC28-205ENST00000469670 MSMO1Q15800 293 aa13.19□□□□□ -0.3
TTC28-205ENST00000469670 STHQ8IWL8 128 aa13.19□□□□□ -0.3
TTC28-205ENST00000469670 DGCR14Q96DF8 476 aaKnown RBP13.19□□□□□ -0.3
TTC28-205ENST00000469670 ZNF705EA8MWA4 302 aaPredicted RBP13.18□□□□□ -0.3
TTC28-205ENST00000469670 MLLT11Q13015 90 aaPredicted RBP13.18□□□□□ -0.3
TTC28-205ENST00000469670 CATR1Q13166 79 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 ZNF773Q6PK81 442 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 ZBTB34Q8NCN2 500 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 OR1L8Q8NGR8 309 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 GIMAP1Q8WWP7 306 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 LSM10Q969L4 123 aaKnown RBP13.18□□□□□ -0.3
TTC28-205ENST00000469670 HINT2Q9BX68 163 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 ACOT13Q9NPJ3 140 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 NDUFA4L2Q9NRX3 87 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 SCN3BQ9NY72 215 aa13.18□□□□□ -0.3
TTC28-205ENST00000469670 TMEM235A6NFC5 223 aa13.17□□□□□ -0.3
TTC28-205ENST00000469670 DNASE2O00115 360 aaPredicted RBP13.17□□□□□ -0.3
TTC28-205ENST00000469670 CD5P06127 495 aa13.17□□□□□ -0.3
TTC28-205ENST00000469670 OR13F1Q8NGS4 319 aa13.17□□□□□ -0.3
TTC28-205ENST00000469670 NDUFAF3Q9BU61 184 aa13.17□□□□□ -0.3
TTC28-205ENST00000469670 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
TTC28-205ENST00000469670 PLEKHA2Q9HB19 425 aa13.17□□□□□ -0.3
TTC28-205ENST00000469670 X6R8D5 127 aa13.17□□□□□ -0.3
TTC28-205ENST00000469670 TRAV1-2A0A0B4J238 106 aa13.16□□□□□ -0.3
TTC28-205ENST00000469670 EIF4EP06730 217 aaKnown RBP13.16□□□□□ -0.3
TTC28-205ENST00000469670 FCGR2CP31995 323 aa13.16□□□□□ -0.3
TTC28-205ENST00000469670 GNG2P59768 71 aa13.16□□□□□ -0.3
TTC28-205ENST00000469670 C12orf74Q32Q52 190 aa13.16□□□□□ -0.3
TTC28-205ENST00000469670 ZNF767PQ75MW2 155 aa13.16□□□□□ -0.3
TTC28-205ENST00000469670 FAM24BQ8N5W8 94 aa13.16□□□□□ -0.3
TTC28-205ENST00000469670 CELA1Q9UNI1 258 aa13.16□□□□□ -0.3
TTC28-205ENST00000469670 ST8SIA3O43173 380 aa13.15□□□□□ -0.3
TTC28-205ENST00000469670 SSX5O60225 188 aa13.15□□□□□ -0.3
TTC28-205ENST00000469670 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
TTC28-205ENST00000469670 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
TTC28-205ENST00000469670 LILRB2Q8N423 598 aa13.15□□□□□ -0.3
TTC28-205ENST00000469670 OR51H1Q8NH63 302 aa13.15□□□□□ -0.3
TTC28-205ENST00000469670 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
TTC28-205ENST00000469670 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.3
TTC28-205ENST00000469670 SLC5A7Q9GZV3 580 aa13.15□□□□□ -0.3
TTC28-205ENST00000469670 NXF2Q9GZY0 626 aaKnown RBP13.15□□□□□ -0.3
TTC28-205ENST00000469670 IGLV2-18A0A075B6J9 118 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 PPYP01298 95 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 APOHP02749 345 aaPredicted RBP13.14□□□□□ -0.31
TTC28-205ENST00000469670 SPP1P10451 314 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 PTHLHP12272 177 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 RAB3BP20337 219 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 C4BPBP20851 252 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 MYL9P24844 172 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 MFAP4P55083 255 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 ARPC4P59998 168 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 ERVK-16P61578 105 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
TTC28-205ENST00000469670 DUSP18Q8NEJ0 188 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 SLC25A46Q96AG3 418 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 MGLLQ99685 303 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 GINS3Q9BRX5 216 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 CCDC90BQ9GZT6 254 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 VSIRQ9H7M9 311 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 COMMD9Q9P000 198 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 TBC1D24Q9ULP9 559 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 OR51B2Q9Y5P1 312 aa13.14□□□□□ -0.31
TTC28-205ENST00000469670 IFNA10P01566 189 aa13.13□□□□□ -0.31
TTC28-205ENST00000469670 SOHLH1Q5JUK2 328 aa13.13□□□□□ -0.31
TTC28-205ENST00000469670 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
TTC28-205ENST00000469670 Q6ZR54 194 aa13.13□□□□□ -0.31
TTC28-205ENST00000469670 OR1P1Q8NH06 330 aa13.13□□□□□ -0.31
TTC28-205ENST00000469670 TXN2Q99757 166 aa13.13□□□□□ -0.31
TTC28-205ENST00000469670 NSG2Q9Y328 171 aa13.13□□□□□ -0.31
TTC28-205ENST00000469670 IGHV3-66A0A0C4DH42 116 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 MARCH11A6NNE9 402 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 I3L2K1 104 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 CASQ2O14958 399 aaPredicted RBP13.12□□□□□ -0.31
TTC28-205ENST00000469670 FXYD4P59646 89 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 ZNF818PQ6ZRF7 136 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 BEST4Q8NFU0 473 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 TMEM56Q96MV1 263 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 CLEC5AQ9NY25 188 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
TTC28-205ENST00000469670 RGS10O43665 173 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 IFNA21P01568 189 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 IFNA17P01571 189 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 TOMM20LQ6UXN7 152 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 UBE2DNLQ8IWF7 75 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 MAPKAPK5-AS1Q8N8E1 139 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 CSNK1G2-AS1Q8NCQ2 148 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 DUSP21Q9H596 190 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 TMEM14BQ9NUH8 114 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 TPRKBQ9Y3C4 175 aa13.11□□□□□ -0.31
TTC28-205ENST00000469670 KNCNA6PVL3 124 aa13.1□□□□□ -0.31
TTC28-205ENST00000469670 GNG7O60262 68 aa13.1□□□□□ -0.31
TTC28-205ENST00000469670 SNAPC5O75971 98 aa13.1□□□□□ -0.31
TTC28-205ENST00000469670 SCGNO76038 276 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms