RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PRR20EP86478 221 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 PRR20CP86479 221 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 PRR20DP86480 221 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 PRR20BP86481 221 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 PRR20AP86496 221 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 LILRB2Q8N423 598 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 CD300LFQ8TDQ1 290 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 RARRES2Q99969 163 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 RHPN1-AS1Q9BWJ2 59 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 EHFQ9NZC4 300 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 RAB26Q9ULW5 256 aa9.01□□□□□ -0.97
HDAC3-204ENST00000469207 YIF1AO95070 293 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 F2RP25116 425 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 HSPA13P48723 471 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 HERV-K104P61576 105 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 LGALS9CQ6DKI2 356 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 SPSB3Q6PJ21 355 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 DHRS11Q6UWP2 260 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 TMEM116Q8NCL8 245 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 SLC25A46Q96AG3 418 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 ZNF2Q9BSG1 426 aaPredicted RBP9□□□□□ -0.97
HDAC3-204ENST00000469207 CSTL1Q9H114 145 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 DIABLOQ9NR28 239 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 COMMD9Q9P000 198 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 FBXL17Q9UF56 701 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 ETV7Q9Y603 341 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 DNAH6Q9C0G6 4158 aa9□□□□□ -0.97
HDAC3-204ENST00000469207 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
HDAC3-204ENST00000469207 IGHV7-4-1A0A0J9YVY3 117 aa8.99□□□□□ -0.97
HDAC3-204ENST00000469207 C15orf62A8K5M9 175 aa8.99□□□□□ -0.97
HDAC3-204ENST00000469207 APOHP02749 345 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-204ENST00000469207 ATF4P18848 351 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-204ENST00000469207 ERVK-16P61578 105 aa8.99□□□□□ -0.97
HDAC3-204ENST00000469207 OR11H2Q8NH07 326 aa8.99□□□□□ -0.97
HDAC3-204ENST00000469207 LSM10Q969L4 123 aaKnown RBP8.99□□□□□ -0.97
HDAC3-204ENST00000469207 DGCR14Q96DF8 476 aaKnown RBP8.99□□□□□ -0.97
HDAC3-204ENST00000469207 VCX3BQ9H321 246 aa8.99□□□□□ -0.97
HDAC3-204ENST00000469207 PCLOQ9Y6V0 5065 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 IGHV3-66A0A0C4DH42 116 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 MPTX1A8MV57 137 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 I3L2K1 104 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 CYB5BO43169 146 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 MRPS14O60783 128 aaKnown RBP8.98□□□□□ -0.97
HDAC3-204ENST00000469207 SNAPC5O75971 98 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 PHLDA2Q53GA4 152 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 FAM90A2PQ658T7 463 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 LYSMD2Q8IV50 215 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 C11orf45Q8TAV5 145 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 MOB3AQ96BX8 217 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 MISP3Q96FF7 219 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 FXYD6Q9H0Q3 95 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 IFT46Q9NQC8 304 aa8.98□□□□□ -0.97
HDAC3-204ENST00000469207 TRAV14DV4A0A0A6YYC5 116 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 A0A0A6YYH2 397 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 A6NJ64 397 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 NUPL2O15504 423 aaKnown RBP8.97□□□□□ -0.97
HDAC3-204ENST00000469207 XRCC3O43542 346 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 MT-CO2P00403 227 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 IGKV1-39P01597 117 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 IGKV1D-39P04432 117 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 FGF2P09038 288 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 CBX5P45973 191 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 SCAND1P57086 179 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 NEDD8Q15843 81 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 IZUMO4Q1ZYL8 232 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 SPINK9Q5DT21 86 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 LEMD1Q68G75 181 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 THOC7Q6I9Y2 204 aaKnown RBP8.97□□□□□ -0.97
HDAC3-204ENST00000469207 HSD17B13Q7Z5P4 300 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-204ENST00000469207 FAM24BQ8N5W8 94 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 TMEM217Q8N7C4 229 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 TSPAN14Q8NG11 270 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 FCGR1BQ92637 280 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 OR10C1Q96KK4 312 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 TMEM56Q96MV1 263 aa8.97□□□□□ -0.97
HDAC3-204ENST00000469207 DNAH2Q9P225 4427 aa8.96□□□□□ -0.97
HDAC3-204ENST00000469207 DFFBO76075 338 aa8.96□□□□□ -0.98
HDAC3-204ENST00000469207 HLA-DMAP28067 261 aa8.96□□□□□ -0.98
HDAC3-204ENST00000469207 MFAP4P55083 255 aa8.96□□□□□ -0.98
HDAC3-204ENST00000469207 RBMS2Q15434 407 aaKnown RBP8.96□□□□□ -0.98
HDAC3-204ENST00000469207 TOMM20LQ6UXN7 152 aa8.96□□□□□ -0.98
HDAC3-204ENST00000469207 TCF24Q7RTU0 167 aa8.96□□□□□ -0.98
HDAC3-204ENST00000469207 OR1P1Q8NH06 330 aa8.96□□□□□ -0.98
HDAC3-204ENST00000469207 ST8SIA2Q92186 375 aa8.96□□□□□ -0.98
HDAC3-204ENST00000469207 PINX1Q96BK5 328 aaKnown RBP8.96□□□□□ -0.98
HDAC3-204ENST00000469207 S100A16Q96FQ6 103 aaKnown RBP8.96□□□□□ -0.98
HDAC3-204ENST00000469207 NXF2Q9GZY0 626 aaKnown RBP8.96□□□□□ -0.98
HDAC3-204ENST00000469207 TMEM14BQ9NUH8 114 aa8.96□□□□□ -0.98
HDAC3-204ENST00000469207 C15orf61A6NNL5 157 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 GPR31O00270 319 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 CA1P00915 261 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-204ENST00000469207 IFNA4P05014 189 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 RPS19P39019 145 aaKnown RBP8.95□□□□□ -0.98
HDAC3-204ENST00000469207 TAS2R20P59543 309 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 DEFB131AP59861 70 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 RELQ04864 619 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-204ENST00000469207 CMTM1Q8IZ96 169 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 OR5H2Q8NGV7 314 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 OR6F1Q8NGZ6 308 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 GATAD1Q8WUU5 269 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms