RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 DEFB108BQ8NET1 73 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 FGFBP3Q8TAT2 258 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 SSC4DQ8WTU2 575 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 ZNF799Q96GE5 643 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 OR2D2Q9H210 308 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 SPRR3Q9UBC9 169 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 VPREB3Q9UKI3 123 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 PIGLQ9Y2B2 252 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 HILPDAQ9Y5L2 63 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 CRYBG3Q68DQ2 2970 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 SNURFLB1AK76 121 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 M0R1B8 84 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 HS3ST1O14792 307 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 ZNF728P0DKX0 622 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 ZNF585BQ52M93 769 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 GMPPAQ96IJ6 420 aaPredicted RBP8.34□□□□□ -1.07
NUP50-214ENST00000469163 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.34□□□□□ -1.07
NUP50-214ENST00000469163 ZNF324O75467 553 aaPredicted RBP8.33□□□□□ -1.08
NUP50-214ENST00000469163 FCGR2AP12318 317 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 HTR1DP28221 377 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 GNG4P50150 75 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 RPS4Y2Q8TD47 263 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 RAX2Q96IS3 184 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 GPR82Q96P67 336 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 SPATA25Q9BR10 227 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 TM2D1Q9BX74 207 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 A0A1W2PP11 408 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 PRRG2O14669 202 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 SPINK4O60575 86 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 DXOO77932 396 aaKnown RBP8.33□□□□□ -1.08
NUP50-214ENST00000469163 HIST1H1EP10412 219 aaKnown RBP8.33□□□□□ -1.08
NUP50-214ENST00000469163 HIST1H1DP16402 221 aaKnown RBP8.33□□□□□ -1.08
NUP50-214ENST00000469163 FSTP19883 344 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 F2RP25116 425 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 ROM1Q03395 351 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 MRPL30Q8TCC3 161 aaKnown RBP8.33□□□□□ -1.08
NUP50-214ENST00000469163 KCNS1Q96KK3 526 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 JMJD1CQ15652 2540 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 CHD6Q8TD26 2715 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 TRBV5-5A0A0J9YX44 114 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 C9orf118A6NHY6 69 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 NGFP01138 241 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 IGHV3-13P01766 116 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 IGHV3-7P01780 117 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 ZCCHC24Q8N2G6 241 aaKnown RBP8.33□□□□□ -1.08
NUP50-214ENST00000469163 RCHY1Q96PM5 261 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 OBP2BQ9NPH6 170 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 CRIM1Q9NZV1 1036 aa8.33□□□□□ -1.08
NUP50-214ENST00000469163 A0A1W2PS18 150 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 hDV102S1A0JD36 115 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 CEACAM4O75871 244 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 FABP2P12104 132 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 VDAC1P21796 283 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 LINC01590Q5TEZ4 76 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 ZBTB34Q8NCN2 500 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 VSTM2AQ8TAG5 236 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 PBOV1Q9GZY1 135 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 RPRMQ9NS64 109 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 NXPH3O95157 252 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 PRB1P04280 392 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 DYNLT3P51808 116 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 C19orf35Q6ZS72 473 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 LYZL2Q7Z4W2 148 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 DTX1Q86Y01 620 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 TMEM171Q8WVE6 324 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 LHX4Q969G2 390 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 NAT8BQ9UHF3 227 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 WIPF3A6NGB9 483 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 TMEM212A6NML5 194 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 PRTN3P24158 256 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 FAM27E3Q08E93 113 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 FHL1Q13642 323 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 ETDBQ3ZM63 59 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 GLIPR1L1Q6UWM5 242 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 C8orf86Q6ZUL3 223 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 GJC3Q8NFK1 279 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 SPTSSAQ969W0 71 aa8.32□□□□□ -1.08
NUP50-214ENST00000469163 MTORP42345 2549 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 UTP20O75691 2785 aaKnown RBP8.31□□□□□ -1.08
NUP50-214ENST00000469163 ZNF878C9JN71 531 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 M0R2Z0 102 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 HSBP1O75506 76 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 WNT2P09544 360 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 GPR183P32249 361 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 MDH2P40926 338 aaKnown RBP8.31□□□□□ -1.08
NUP50-214ENST00000469163 SUMO3P55854 103 aaPredicted RBP8.31□□□□□ -1.08
NUP50-214ENST00000469163 CATR1Q13166 79 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 RPEL1Q2QD12 228 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 LINC00114Q6XXX2 140 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 RNF144BQ7Z419 303 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 EMG1Q92979 244 aaKnown RBP8.31□□□□□ -1.08
NUP50-214ENST00000469163 NAV3Q8IVL0 2385 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 TRBV5-7A0A0A0MS05 114 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 MDFIC2A0A1B0GVS7 189 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 A6NDN8 102 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 SSSCA1O60232 199 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 PSMB3P49720 205 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 ZNF324BQ6AW86 544 aaPredicted RBP8.31□□□□□ -1.08
NUP50-214ENST00000469163 SH2D6Q7Z4S9 175 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms