RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 OR5B3Q8NH48 314 aa16.32■□□□□ 0.2
TTC28-204ENST00000468807 SCARB1Q8WTV0 552 aa16.32■□□□□ 0.2
TTC28-204ENST00000468807 TMEM190Q8WZ59 177 aa16.32■□□□□ 0.2
TTC28-204ENST00000468807 IGHV3OR16-8A0A075B7F1 116 aa16.31■□□□□ 0.2
TTC28-204ENST00000468807 LCE6AA0A183 80 aa16.31■□□□□ 0.2
TTC28-204ENST00000468807 C15orf61A6NNL5 157 aa16.31■□□□□ 0.2
TTC28-204ENST00000468807 C8orf88P0DMB2 117 aa16.31■□□□□ 0.2
TTC28-204ENST00000468807 ELLP55199 621 aaPredicted RBP16.31■□□□□ 0.2
TTC28-204ENST00000468807 MZT2AQ6P582 158 aa16.31■□□□□ 0.2
TTC28-204ENST00000468807 H2BFWTQ7Z2G1 175 aa16.31■□□□□ 0.2
TTC28-204ENST00000468807 OR4A16Q8NH70 328 aa16.31■□□□□ 0.2
TTC28-204ENST00000468807 TRAV25A0A0B4J276 109 aa16.3■□□□□ 0.2
TTC28-204ENST00000468807 SPSB3Q6PJ21 355 aa16.3■□□□□ 0.2
TTC28-204ENST00000468807 AP3S1Q92572 193 aa16.3■□□□□ 0.2
TTC28-204ENST00000468807 MRGPRFQ96AM1 343 aa16.3■□□□□ 0.2
TTC28-204ENST00000468807 MISP3Q96FF7 219 aa16.3■□□□□ 0.2
TTC28-204ENST00000468807 CHRDL1Q9BU40 450 aa16.3■□□□□ 0.2
TTC28-204ENST00000468807 GGTLC1Q9BX51 225 aa16.3■□□□□ 0.2
TTC28-204ENST00000468807 DAZ1Q9NQZ3 744 aaKnown RBP16.3■□□□□ 0.2
TTC28-204ENST00000468807 TMEM14BQ9NUH8 114 aa16.3■□□□□ 0.2
TTC28-204ENST00000468807 DNAH1Q9P2D7 4330 aa16.29■□□□□ 0.2
TTC28-204ENST00000468807 ZNF207O43670 478 aaKnown RBP16.29■□□□□ 0.2
TTC28-204ENST00000468807 PGAM2P15259 253 aa16.29■□□□□ 0.2
TTC28-204ENST00000468807 CADM3Q8N126 398 aa16.29■□□□□ 0.2
TTC28-204ENST00000468807 NAA50Q9GZZ1 169 aaKnown RBP16.29■□□□□ 0.2
TTC28-204ENST00000468807 HYDINQ4G0P3 5121 aa16.28■□□□□ 0.2
TTC28-204ENST00000468807 LOC102724200A0A096LPH7 203 aaPredicted RBP16.28■□□□□ 0.2
TTC28-204ENST00000468807 K7EIM0 57 aa16.28■□□□□ 0.2
TTC28-204ENST00000468807 NDUFA4O00483 81 aa16.28■□□□□ 0.2
TTC28-204ENST00000468807 UCP3P55916 312 aa16.28■□□□□ 0.2
TTC28-204ENST00000468807 OR2C3Q8N628 320 aa16.28■□□□□ 0.2
TTC28-204ENST00000468807 SEC22AQ96IW7 307 aa16.28■□□□□ 0.2
TTC28-204ENST00000468807 C5orf66Q9H5L9 145 aa16.28■□□□□ 0.2
TTC28-204ENST00000468807 FAM212BQ9NTI7 297 aaPredicted RBP16.28■□□□□ 0.2
TTC28-204ENST00000468807 EXTL2Q9UBQ6 330 aa16.28■□□□□ 0.2
TTC28-204ENST00000468807 UBQLN2Q9UHD9 624 aa16.28■□□□□ 0.2
TTC28-204ENST00000468807 IGKV1-39P01597 117 aa16.27■□□□□ 0.2
TTC28-204ENST00000468807 IGKV1D-39P04432 117 aa16.27■□□□□ 0.2
TTC28-204ENST00000468807 PI3P19957 117 aa16.27■□□□□ 0.2
TTC28-204ENST00000468807 RNASE10Q5GAN6 216 aaKnown RBP16.27■□□□□ 0.2
TTC28-204ENST00000468807 LAMTOR1Q6IAA8 161 aa16.27■□□□□ 0.2
TTC28-204ENST00000468807 OR1P1Q8NH06 330 aa16.27■□□□□ 0.2
TTC28-204ENST00000468807 IL17DQ8TAD2 202 aa16.27■□□□□ 0.2
TTC28-204ENST00000468807 KLK11Q9UBX7 282 aa16.27■□□□□ 0.2
TTC28-204ENST00000468807 F8W735 103 aaPredicted RBP16.26■□□□□ 0.19
TTC28-204ENST00000468807 ADMP35318 185 aa16.26■□□□□ 0.19
TTC28-204ENST00000468807 GPR107Q5VW38 600 aa16.26■□□□□ 0.19
TTC28-204ENST00000468807 PINX1Q96BK5 328 aaKnown RBP16.26■□□□□ 0.19
TTC28-204ENST00000468807 ATP6V0BQ99437 205 aa16.26■□□□□ 0.19
TTC28-204ENST00000468807 SPAG8Q99932 426 aaPredicted RBP16.26■□□□□ 0.19
TTC28-204ENST00000468807 PLECQ15149 4684 aaKnown RBP16.25■□□□□ 0.19
TTC28-204ENST00000468807 NUPL2O15504 423 aaKnown RBP16.25■□□□□ 0.19
TTC28-204ENST00000468807 YIF1AO95070 293 aa16.25■□□□□ 0.19
TTC28-204ENST00000468807 GABARAPO95166 117 aa16.25■□□□□ 0.19
TTC28-204ENST00000468807 IGHV3-48P01763 117 aa16.25■□□□□ 0.19
TTC28-204ENST00000468807 CD3DP04234 171 aa16.25■□□□□ 0.19
TTC28-204ENST00000468807 ZNF182P17025 639 aaPredicted RBP16.25■□□□□ 0.19
TTC28-204ENST00000468807 PRCDQ00LT1 54 aa16.25■□□□□ 0.19
TTC28-204ENST00000468807 SPINK9Q5DT21 86 aa16.25■□□□□ 0.19
TTC28-204ENST00000468807 OR52I2Q8NH67 350 aa16.25■□□□□ 0.19
TTC28-204ENST00000468807 TSPAN4O14817 238 aa16.24■□□□□ 0.19
TTC28-204ENST00000468807 SMIM18P0DKX4 95 aa16.24■□□□□ 0.19
TTC28-204ENST00000468807 PPP5CP53041 499 aa16.24■□□□□ 0.19
TTC28-204ENST00000468807 PIGPP57054 158 aa16.24■□□□□ 0.19
TTC28-204ENST00000468807 RELQ04864 619 aaPredicted RBP16.24■□□□□ 0.19
TTC28-204ENST00000468807 CTF1Q16619 201 aa16.24■□□□□ 0.19
TTC28-204ENST00000468807 IZUMO4Q1ZYL8 232 aa16.24■□□□□ 0.19
TTC28-204ENST00000468807 MT-CO2P00403 227 aa16.23■□□□□ 0.19
TTC28-204ENST00000468807 CTSGP08311 255 aa16.23■□□□□ 0.19
TTC28-204ENST00000468807 AKR1C2P52895 323 aa16.23■□□□□ 0.19
TTC28-204ENST00000468807 MFAP4P55083 255 aa16.23■□□□□ 0.19
TTC28-204ENST00000468807 HSPE1P61604 102 aaKnown RBP16.23■□□□□ 0.19
TTC28-204ENST00000468807 ERHP84090 104 aaKnown RBP16.23■□□□□ 0.19
TTC28-204ENST00000468807 IGHV3-49A0A0A0MS15 119 aa16.22■□□□□ 0.19
TTC28-204ENST00000468807 C15orf62A8K5M9 175 aa16.22■□□□□ 0.19
TTC28-204ENST00000468807 I3L2K1 104 aa16.22■□□□□ 0.19
TTC28-204ENST00000468807 K7EMT4 169 aa16.22■□□□□ 0.19
TTC28-204ENST00000468807 RND3P61587 244 aa16.22■□□□□ 0.19
TTC28-204ENST00000468807 TRIM16LQ309B1 348 aa16.22■□□□□ 0.19
TTC28-204ENST00000468807 SCGB2B2Q4G0G5 96 aa16.22■□□□□ 0.19
TTC28-204ENST00000468807 ARRDC1Q8N5I2 433 aa16.22■□□□□ 0.19
TTC28-204ENST00000468807 ZNF486Q96H40 463 aaPredicted RBP16.22■□□□□ 0.19
TTC28-204ENST00000468807 TP53RKQ96S44 253 aa16.22■□□□□ 0.19
TTC28-204ENST00000468807 OR4C46A6NHA9 309 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 RGS5O15539 181 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 GNG7O60262 68 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 CTSDP07339 412 aaPredicted RBP16.21■□□□□ 0.19
TTC28-204ENST00000468807 APOC4P55056 127 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 LHFPL1Q86WI0 220 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 SLC35G3Q8N808 338 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 ZNF114Q8NC26 417 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 OR4D10Q8NGI6 311 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 ABHD1Q96SE0 405 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 OVOL2Q9BRP0 275 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 PDCD10Q9BUL8 212 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 COPZ2Q9P299 210 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 MTFP1Q9UDX5 166 aa16.21■□□□□ 0.19
TTC28-204ENST00000468807 C3orf85A0A1B0GTC6 90 aa16.2■□□□□ 0.18
TTC28-204ENST00000468807 IFNA17P01571 189 aa16.2■□□□□ 0.18
TTC28-204ENST00000468807 IGKV1-5P01602 117 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms